Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele49g0078 ATGGCGGAGTCTGTGAAGCAAATCTTAGCAAAACCCATCCAGCTAGCTGACCAAGTAATCAAAGCGGCCGATGAGACTAGCAGCTTCAGGAGCGAATGCGCAGAGCTCAAATCCAAGACTGAGAGACTCGCGGGGCTTCTCCGGCAGGCCGCGAGAGCCAGCTCCGATCTCTATGAACGTCCTGCGCGGCGGATCATCGAAGAAACCGAGCAGGTCCTCACCAAAGCCCACTCCTTGATTCTCAAGTGCCGCGCCAATGGCCTGGTGAAGCGCGTCTTCACCATCATACCCGCCGCCGCTTTTCGTAAGATGTCTATCCAGCTCGAGAACTCAATCGGAGACGTGTCCTGGCTCCTTCGCGTGTCCGCTCCGGCGGGGGATCGCGGCGACGAGTATCTGGGTCTTCCACCGATCGCCGCAAACGAACCGAATCTGTATCTCATATGGGAGCAAGTCGCGACACTCTACACGGGTTCTCTGGAGGAGCGATCTGATGCGGCGGCTTCGCTGGTATCACTCGCTAGAGACAACGATCGATACGCGAAGTTGATAATCGAGGAAGGTGGCGTTGGGCCGTTGTTGAAATTGCTCAAAGAGGGTAAGATGGAAGGTCAAGAGAATGCTGCGAAAGCAATTGGGCTTCTGGGTCGTGACCCCGAGAGCGTAGAGCACCTGCTCCACGCCGGAATATGCTCTGTGTTTGCGAAAATCCTTAAAGATGGTCCCATGAAAGTGCAAGCTGAGGTGGCCTCGGCTGCATCGGAGCTGGCTGCGAATTATCCCAAATGCCAAGATGTCTTTGCTCAGCACAATATCATCCGATTGCTCGTCAGCCATCTTGCATTCGAAACCGTTCAAGAACACAGTAAGTATGCCATTGATCGCATCAAAGCCACATCAATCCACGCGGTTGTTATGGCAAGTAGTAATTATAATCCTAATTCAAATAACACCAATGCCAAGAAGTCCAACGAAGACGACGAGAATCAGATTCAGAGTCGGATACAACATCCATCGGGTAATGGAACAGCTTCTCAGCTGCATAGAGTGATCACAAGTACTATGGCGATGAATGCTACTTCCCAGCCTAATGAAGGAAACGGAGGGAATCAGAACTCCCAAACCAGTCAACCCAAGAGCAATGGTCAGAGTCAGAGTAACGGGAAGCAGACTCATCAACCGCATCACCAGCCAAGCTATTCACATTCGGGGATTAACATGAAGGGAAGGGAACTAGAGAGCCCTGAGACTAAGGCCAAAATGAAAGCAATGGCGGCAAGAGCGCTCTGGCACCTAGTCAAGGGTAACTCACCCATCTGTCGTAGCATCACAGAATCAAGGGCTCTCCTGTGCTTTGCAGTACTCCTCGAGAAAGGACGTGAAGATGTGCAGTTCAATTCTGCCATGGCAGTGATGGAGATTACTGCAGTGGCAGAGAAAGATGCTGATCTCAGAAGATCAGCGTTCAAGCCTAACTCTCCTGCATGCAAAGCAGTTGTTGATCAAGTGCTTAAGATCATAGAGAAGGCAGATTCAGAGCTGTTGATTCCTTGCATGAAAGCTATTGGGAATTTAGCGAGGACATTCAGAGCAACGGAGACATGGATGATTGCTCCTTTAGTACGACTTCTGGATGAAAGGGATGCAGAGGTATCAAGAGAGGCATGTATAGCCCTCACCAAATTTGCCTGCTCGGAGAACTACCTTCACCTGGATCACTCCAAGGCCATAATAAGCGCTGGTGGGGCAAAACATCTGTTACAGCTTGTGTATTTTGGAGAACAAATCGTTCAGATATCAGCAGTAGTTTTGCTCTGCTACATTGCACTTCATGTCCCAGACAGCGAAGAACTCGCCGAGGCTGAGGTTCTGATGGTGCTGGAATGGGCATCCAAGCAATCCTCCATGACGCAGGACGAAACTATCGAGGTGTTGTTGCAGGAAGCCAAGAGTAGGTTGGAGCTTTACCAGTCTAGAGGTTCCAGAGGATTCCATTGA 1998 0.5055 MAESVKQILAKPIQLADQVIKAADETSSFRSECAELKSKTERLAGLLRQAARASSDLYERPARRIIEETEQVLTKAHSLILKCRANGLVKRVFTIIPAAAFRKMSIQLENSIGDVSWLLRVSAPAGDRGDEYLGLPPIAANEPNLYLIWEQVATLYTGSLEERSDAAASLVSLARDNDRYAKLIIEEGGVGPLLKLLKEGKMEGQENAAKAIGLLGRDPESVEHLLHAGICSVFAKILKDGPMKVQAEVASAASELAANYPKCQDVFAQHNIIRLLVSHLAFETVQEHSKYAIDRIKATSIHAVVMASSNYNPNSNNTNAKKSNEDDENQIQSRIQHPSGNGTASQLHRVITSTMAMNATSQPNEGNGGNQNSQTSQPKSNGQSQSNGKQTHQPHHQPSYSHSGINMKGRELESPETKAKMKAMAARALWHLVKGNSPICRSITESRALLCFAVLLEKGREDVQFNSAMAVMEITAVAEKDADLRRSAFKPNSPACKAVVDQVLKIIEKADSELLIPCMKAIGNLARTFRATETWMIAPLVRLLDERDAEVSREACIALTKFACSENYLHLDHSKAIISAGGAKHLLQLVYFGEQIVQISAVVLLCYIALHVPDSEELAEAEVLMVLEWASKQSSMTQDETIEVLLQEAKSRLELYQSRGSRGFH 665
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele49g0078 665 FunFam Armadillo repeat only 4 2 121 - -
Lele49g0078 665 MobiDBLite consensus disorder prediction 359 418 - -
Lele49g0078 665 Gene3D - 491 646 IPR011989 -
Lele49g0078 665 SMART arm_5 436 476 IPR000225 GO:0005515
Lele49g0078 665 SMART arm_5 570 610 IPR000225 GO:0005515
Lele49g0078 665 SMART arm_5 176 217 IPR000225 GO:0005515
Lele49g0078 665 SMART arm_5 524 564 IPR000225 GO:0005515
Lele49g0078 665 SMART arm_5 218 258 IPR000225 GO:0005515
Lele49g0078 665 Gene3D - 410 490 IPR011989 -
Lele49g0078 665 Gene3D - 150 331 IPR011989 -
Lele49g0078 665 SUPERFAMILY ARM repeat 154 637 IPR016024 -
Lele49g0078 665 Gene3D - 2 121 IPR036537 GO:0007166
Lele49g0078 665 MobiDBLite consensus disorder prediction 359 404 - -
Lele49g0078 665 PANTHER ARMADILLO REPEAT ONLY 4 1 661 - -
Lele49g0078 665 FunFam Armadillo repeat only 2 399 653 - -
Lele49g0078 665 Pfam Armadillo/beta-catenin-like repeat 178 214 IPR000225 GO:0005515
Lele49g0078 665 MobiDBLite consensus disorder prediction 309 345 - -
Lele49g0078 665 FunFam Armadillo repeat only 2 150 320 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele49g0078 Lele-ChrLele49 477800 479797 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele49g0078 49 477800 479797 Lele51g0089 51 507559 509562 hybridization
Lele49g0078 49 477800 479797 Lele52g0093 52 560601 562595 hybridization