Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele52g0038 ATGGCTTGTATGAGCGACGGGAGCTGGGTTTATCTCCCCTCAATGTTATCAGGGACTCTGCCTCTCGGAGGCCGAGAGCTCCAAAACAAAACTGACGAACCCAACAGCTTCGACTTCTTGTCTCCGGCTTATCGGTTGGAGAGAGTTTTGCCCTTATATGCTATGGGGACTCCCAACCCAGATTCCGTAGATAATTCAGGTGGGGCTGACCTGAATTGGGACGCCGTCAGACAAGAAGCTAAGTTGGAGGTGCATATTTGTGTTTTATTTCATGATTGCTTGGAGCAAGCCTTAGCCTTCGTTCTTGTCAATCGTCTTCAAAATCCTACTCTTTTGGCAACTCAGCTGACAGATATATTTTGTCATGTGATGATGCATGATAAAGGTATCCAAAGATCAATTCGCCTGGATGTGCAGGCATTTAAATACCGGGATCCTGCTTGCTTATCATATTGCTCCTCACTTTTATATATGAAGGGCTACCATGCTTTGCAAGTTCATCGAGTAGCCCATGGATTGTGGGGCCAGGGACGCCAAGTCTTGGCCTCAGCTTTGCAAAGTCGAGTCAGTTTTGGGAATAGACATACATCCTGTGTACTTTTGGGTGTTACTTTGGGAGGTTCAGGGAAGGAAATAGGTGATCGCCACCCCAAAATAGGTGATGGGGCACTCATTGGAGCTTGTGCAACTATACTTGGGAACATAAGAATTGGTAAAGGAATACCAGCAAATGTTATTGGACATCTACATGAGCATGACCCATCTTTAAGCATGAAACAGGATGCTACAAAAGATTATTTCAAGCACATAGCCGCTAACTTCAGAAATGGGAAGTCTACAGGAGCTCAGGATCCAGATAGAAATGGTTCGTCAATTCTTCCAACGGCTTGGATTGCCTCTTTTCAGCGCCCTTCATCATTTTCATTCCTACCATGCTCAGACGATCCAAACGCGAAAATAACCACCGGAACGACCGGATTATGTACAAAACACGATTACCCAAATAAAGTATCGCGAGGATCAAAGTCCAAATCTAAATCCAAATGCATCCTCGGAGGAAATGTGCAAGCACTGAGCCCTTGGAAACGGCATCGTTTCTCTTTTGCTTCCTCGCTCTTGGAATATGGTGTTAGATCCAATCCTCCACCAGCGATCTCGCCTGACCTCCTCCATTTCTCCAAGCTTCACTCTCCCTTGGCAACAAGTAAAGGTGATATCAGTGGAATTATGGAAAGTCATGAAGGAGATTCTCCTAAACCTGAGGGGCTGTTCACAGACAGGAATCATCACAATCATGGAAGCTATGGAAATCTCGTTTTAGAAAATGGCGTATCTGATGACAACCGCTGTCAAGTTGATCCTGAGGATCAGCTTCTACAATTGGCCTTTGAACTTAGATTTCAGAATGATTTTTTTAAGTCTCAGTTTGAGGGCTTTAACAGTCTAAACATTGTACATAATGACTCTAGTATGGGGAAAAATGTTAGTGGCCCAGAAGAAGTTAAATCTGATATCATTGAAGAACTGCAGGGAAGGATACAAGCATTAAATAAAGAACTTTTAGATGAAAAACAAACGAGAGGTGCAGCTGAAGAGGCTCTAAAGCATCTTCAATTGGCATACTCAGAGGCAGATGGGAAAGCTCAAGAGCTGTCTGAAAAGCTTGCTGAAGCTGAAAAGAAGTTGGATCAAGAAATAAAAGAGCGTGAAGAAAAGTATACTGAACTTGATACAAAGTTTAACAGGCTTCACAAACGAGCAAAACAGCGCATTCAGGAGGTTCAGAAGGAAAAAGATGATCTTGAGGTCCAATTGCGTGAGGTGAATGAAAAGGCTGAGCAAGCATCATCCCAGCAATCGTCATTGCAGCAAGAGTTAGAGCGCACAAGGCAACAAGCAAATGAGGCATTGAAGGCCATGGATGGGGACAGGCAGCAACTAAGAAGTGCAAATAACAAACTTCGTGATACCATTGAGGATTTGAGGCGTTCATTGCAACCAAAGGAGAGTGCCCTCGAAGCATTGCAAGAGTCACTTGCAGAAAAGGAACAGATGATAGAAGATATGAGAGGTTTGCTTCAGGCAGCCGATGAAAAGAAGCAAGCTGCACTGACTGAGCTTTCAGCTAAACATCAGAAGAATATGGAGAGTTTGGAAGCTCAACTTAACGATGCTGTATCTGATAGAAATAAAGCAGCTGAAACTACTTCATCCCTGCAGGTGCTAGTTGCAGAGAAAGAATCTAAGATTGCTGAGATGGAGGCAGCATCGACTGGGGAAGCTGCACGACTCAGAGCTTCTGTTGAAAGTGTGAAGGGGGAGCTTTCTCACCTGAAACAGGAGCATGTGAAAGAAAAGGAAAGTTGGGCAACTGCAGCTCAGGCACTTAAGGCAAAACTTGAAATTGCGGAGAGTAACTGCATACATGCTGAAATTGAAGTAGCAAAAATGAAAAGTACAAATATATCCTTCTACGAGCTTTCTTATAGTTATCTTAAGGAAGGATATTTATGCTTTTGCGATGGCCAGATCGGCCACCTCGAGAATGAATTTTCTTCCTACAAAGTTCGTGCTCACTCACTTCTTCAGAAGAAGGATGCAGAACTGGCAGCAGCCAAAGACTCTGAGCAAGTCAAAGCTCTTGAGGAAGCTTTAAAAGAGGCTGAAAATGAACTATTATCAATAACAGAAGAAAGGGATAGAGCTCTTCAAGATCTTCAAGATGCAACAAAAATTCACGAGAAAGAACTCACAGAGAGAGATTCAGCACTTGAAAATTTCAAGGAGCAAATAAGGAGTTTAGAAATGAAATTTGATTCTGGTAATGCTCAGCACCTAAAAGAGAAAGAAGCGTGGGGACTCAGCCTTCAAAATGTTGAAGAAACATGGCGAATTAAATATGAGGTCATTAAGGCTGAAACTGAAGGGTCTTCAGCACATGATATACAATTACAAAAGGAACTTGAAGAGCTCAAACAAAAGTACAAAAGATTGAAGGAAGAGCATGATTCTTTTCGTGATCTTGCTGATAGAATGATTCAGGAGAAAGACAGTGAAATATCTAGACTTTTAGATGATAACAATAATCTTCATCAGTCCCAGCAATCAAGCTCATTGGTGGACAAACATGATTATCATAGCACAGATCATTTCCCTTCAGCCTTGCATAATGGGGATTTACTGAACCTAAGCCCCTCATCTGCAGAACAGCAAATTCTGCTTCTGGCTAGACAACAAGCCCAAAGAGAGGAAGAGCTGGCACGATCACAGCGGCATATCTTGGCTCTTCAAGAAGAAATTGAACAACTTGAACGTGAAAATCGTCTCCATAGCCAACAGATTTTGGGTTCATGGTTTTCGACAAACATTCCCATCCTGCAAACTAATGATGCGTGTGAAGCAATGTTAAAGACAGAACTTCGTAACATGGAAAGATCACAAAAGAGGGAAGGAGTAGATATGACCTATTTGAAAAATGTCATTTTAAAGCTTCTTGAGACAGGTGAAGTGGAGGCACTATTGCCAGTCATTGCAATGCTGCTTCAGTTTAGTCCAGAAGAGGTAATATCGTCATCTTATGCTTTACTTGCCTTCCCCATGGAATTGTGTCCTCAACAGAAGTTCCACCAAGTCCAGGAAGTGAATCTTCGGGACCTGGCCTATCTCGTTTCTCAAGATTCTCATTTTCATAGGGGCATAAGTGGCCTATCTCTGCTTCTGCCATGCAGCTATAGGAGTATTAGTTTGCGAAACTCGCGGTTTCGGAGAAAGAAGGGTGTTTTCATCCTCATTTACTTTATTGAGTTGAATATATTTTGA 3819 0.4258 MACMSDGSWVYLPSMLSGTLPLGGRELQNKTDEPNSFDFLSPAYRLERVLPLYAMGTPNPDSVDNSGGADLNWDAVRQEAKLEVHICVLFHDCLEQALAFVLVNRLQNPTLLATQLTDIFCHVMMHDKGIQRSIRLDVQAFKYRDPACLSYCSSLLYMKGYHALQVHRVAHGLWGQGRQVLASALQSRVSFGNRHTSCVLLGVTLGGSGKEIGDRHPKIGDGALIGACATILGNIRIGKGIPANVIGHLHEHDPSLSMKQDATKDYFKHIAANFRNGKSTGAQDPDRNGSSILPTAWIASFQRPSSFSFLPCSDDPNAKITTGTTGLCTKHDYPNKVSRGSKSKSKSKCILGGNVQALSPWKRHRFSFASSLLEYGVRSNPPPAISPDLLHFSKLHSPLATSKGDISGIMESHEGDSPKPEGLFTDRNHHNHGSYGNLVLENGVSDDNRCQVDPEDQLLQLAFELRFQNDFFKSQFEGFNSLNIVHNDSSMGKNVSGPEEVKSDIIEELQGRIQALNKELLDEKQTRGAAEEALKHLQLAYSEADGKAQELSEKLAEAEKKLDQEIKEREEKYTELDTKFNRLHKRAKQRIQEVQKEKDDLEVQLREVNEKAEQASSQQSSLQQELERTRQQANEALKAMDGDRQQLRSANNKLRDTIEDLRRSLQPKESALEALQESLAEKEQMIEDMRGLLQAADEKKQAALTELSAKHQKNMESLEAQLNDAVSDRNKAAETTSSLQVLVAEKESKIAEMEAASTGEAARLRASVESVKGELSHLKQEHVKEKESWATAAQALKAKLEIAESNCIHAEIEVAKMKSTNISFYELSYSYLKEGYLCFCDGQIGHLENEFSSYKVRAHSLLQKKDAELAAAKDSEQVKALEEALKEAENELLSITEERDRALQDLQDATKIHEKELTERDSALENFKEQIRSLEMKFDSGNAQHLKEKEAWGLSLQNVEETWRIKYEVIKAETEGSSAHDIQLQKELEELKQKYKRLKEEHDSFRDLADRMIQEKDSEISRLLDDNNNLHQSQQSSSLVDKHDYHSTDHFPSALHNGDLLNLSPSSAEQQILLLARQQAQREEELARSQRHILALQEEIEQLERENRLHSQQILGSWFSTNIPILQTNDACEAMLKTELRNMERSQKREGVDMTYLKNVILKLLETGEVEALLPVIAMLLQFSPEEVISSSYALLAFPMELCPQQKFHQVQEVNLRDLAYLVSQDSHFHRGISGLSLLLPCSYRSISLRNSRFRRKKGVFILIYFIELNIF 1272
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele52g0038 1272 SUPERFAMILY Trimeric LpxA-like enzymes 87 260 IPR011004 -
Lele52g0038 1272 SMART 1grip 1150 1192 IPR000237 -
Lele52g0038 1272 Gene3D - 499 668 - -
Lele52g0038 1272 ProSiteProfiles GRIP domain profile. 1147 1194 IPR000237 -
Lele52g0038 1272 Coils Coil 981 1015 - -
Lele52g0038 1272 Gene3D Hexapeptide repeat proteins 187 255 - -
Lele52g0038 1272 PANTHER SERINE ACETYLTRANSFERASE 199 240 - -
Lele52g0038 1272 Coils Coil 864 905 - -
Lele52g0038 1272 Coils Coil 506 579 - -
Lele52g0038 1272 Coils Coil 917 944 - -
Lele52g0038 1272 Coils Coil 786 813 - -
Lele52g0038 1272 Coils Coil 584 735 - -
Lele52g0038 1272 MobiDBLite consensus disorder prediction 609 630 - -
Lele52g0038 1272 SMART SATase_N_2_a 73 166 IPR010493 GO:0005737|GO:0006535|GO:0009001
Lele52g0038 1272 Pfam GRIP domain 1151 1187 IPR000237 -
Lele52g0038 1272 Pfam Serine acetyltransferase, N-terminal 84 165 IPR010493 GO:0005737|GO:0006535|GO:0009001
Lele52g0038 1272 Coils Coil 1086 1113 - -
Lele52g0038 1272 MobiDBLite consensus disorder prediction 610 630 - -
Lele52g0038 1272 Gene3D serine acetyltransferase, domain 1 62 186 IPR042122 -
Lele52g0038 1272 Coils Coil 761 781 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele52g0038 Lele-ChrLele52 247069 267212 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele52g0038 69 281 Miscellaneous Gene Families AT2G17640 52.190 8.41e-77 255
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele49g0032 49 214875 224843 Lele52g0038 52 247069 267212 hybridization
Lele50g0036 50 255127 266694 Lele52g0038 52 247069 267212 hybridization