Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele50g0036 ATGGAAAGTCATGAAGGAGATTCTCCTAAACCTGAGGGGCAGTTCACAGACAGGAGTCATCACAATCATGGAAGCTATGGAAATCTCGTATTAGAAAATGGCTTATCTGATGAAAACCGCTGTCAAGTTGATCCTGAGGATCAGCTTCTACAATTGGCCTTTGAACTTAGATTTCAGAATGATTTTTTTAAGTCTCAGTTTGAGGGCTTTAACAGTCTAAACAGTGTACATAATGACTCTAGTATGGGGAAAAATGTTAGTGGCCCAGAAGAAGTTAAATCTGATATCATTGAAGAACTGCAGGGAAGGATACAAGCATTAAATAAAGAACTTATAGATGAAAAACAAATGAGAGGTGCAGCTGAAGAGGCTCTAAAGCATCTTCAATTGGCATACTCAGACGCAGATGGGAAAGCTCTAGAGCTGTCTGAAAAGCTTGCTGAAGCTGAAAAGAAGTTGGATCAAGAAATAAAAGAGCGTGAAGAAAAGTATACTGAACTTGATACAAAGTTTAACAGGCTTCACAAACGAGCAAAACAGCGCATTCAGGAGGTTCAGAAGGAAAAAGATGATCTTGAGGTCCAATTGCGTGAGGTGAATGGAAAGGCTGAGCAAGCATCATCCCAGCAATCGTCATTGCAGCAAGAGTTAGAGCGCACAAGGCAACAAGCAAATGAGGCATTGAAGGCCATGGATGGGGACAGACAGCAACTAAGAAGTGCAAATAACAAACTTCGCGATACCATTGAGGATTTGAGGCGTTCATTGCAACCAAAGGAGAGTGCCCTCGAAGCATTGCAGCAATCACTTGCAGAAAAGGAACAGATGATAGAAGATATGAGAGGTTTGCTTCAGGCAGCTGATGAAAAGAAGCAAGCTGCACTGACTGAGCTTTCAGCTAAACATCAGAAGAATATGGAGAGCTTGGAAGCTCAACTTAACGATGCTATATCTGATAGAAATAAAGCAGCTGAAACTATTTCATCACTGCAGGTGCTAGTTGCAGAGAAAGAAACTAAGATTGCTGAGATGGAGGCAGCATCGACTGGGGAAGCTGCACGACTCAGAGCAGCTGTTGAAAGTGTGAAGGGGGAGCTTTCTCACCTGAAACAGGAGCATGAGAAAGAAAAGGAAAGTTGGGCAACTGCAGCTCAGGCGCTTAAGGCAAAACTTGAAATTGCGGAGAGCAACTGCATACATGCTGAAATTGAAGTAGCAAAAATGAGAAGTCAGCTGGAATCAGAAGTATCTGCACAAACCAGGATTCTCAATATGAGAGATGCAGAATTGTTGTCTGCCAAGGAAGAGATTGGCCGCCTCGAGAATGAATTTTCTTCCTACAAAGTTCGTGCTCACTCACTTCTCCAGAAGAAGGATGCAGAACTGGCAGCAGCCAAAGACTCTGAGCAAGTCAAAGCTCTTGAGGAAGCTTTAAAAGAGGCTGAAAATGAAGTATTATCAATAACAGAAGAAAGGGATAGAGCTCTTCAAGATCTTCAAGATTCAACAAAAATTCACGAGAAAGAACTCACAGAAAGAGACTCAGCACTTGAAAATTTCAAGGAGCAAATAAGGAGTTTAGAAATGAAATTTGATTCTGTTAATGCTCAGCACCTAAAAGAGAAAGAAGCGTGGGGACTCAGCCTTCAAAATGTTGAAGAAACGTGGCGAATTAAATATGAGGCCATGAAGGCTGAAACTGAAGGATCTTTGGCACATGATATACAACTACGAAAGGAACTTGAAGAGCTCAAACAAAAGTACAAAAGATTGAAGGAAGAGCATGATTCTTTTCGTGATCTTGCTGATAGAATGATTCAGGAGAAAGACAGTGAAATATCTAGACTTTTACATGATAACAATAATCTTCATCAATCCCAGCAATCAACCTCATTGGTGGACAAACATGATTATCATAGCACAGATCATTTCCCTTCAGTCTTGCATAATGGGGATTTACTGAACCTAAGCCCCTCATCTGCAGAACAGCAAATTCTGCTTCTGGCTAGACAACAAGCCCAAAGAGAGGAAGAGCTGGCACGATCACAGCGGCATATCTTGGCTCTTCAAGAAGAAATTGAAGAACTTGAACGTGAAAATCGTCTCCATAGCCAACAGTGTCCAGATTTGAAGCCTGTAATTCTTTGTTTGGCCTCTAACTTACTTGAAGAACTTCAGATTTTGGGTTCATGGCCAATTCTGGCAGCTAATTATTCGTTTTACGAGTTTGTGGTATTCTTAGCTTATCCTATTTTCCCTATTATTCATGCAATGTTAAAGACAGAACTTCGTAACATGGAAAGATCACAAAAGAGGGAAGGCGTGGATATGACCTATTTGAAAAATGTCATTTTAAAGCTTCTTGAGACAGGTGAAGTGGAGGCACTATTGCCAGTCATTGCAATGCTGCTTCAGTTTAGTCCAGAAGAGGTAATGTCGTCATTTTATGCTTTACTTGCCTTCCCCATGGAATTGTGTCGTAAGGATCACTTCAAAAGTTTAAGGTGTAATCGTAAGGTTCATGATGATTTTAATCTCCAAAACTCCCTCTCCCAAGAAAACCCTCTGAACTCTCCCAAAAGTTATGCCATATTGGTGAAAGAAACAGCTGAGTGTGATTCAAATGCAAGTGCAGATGCAGAAGTGTCAACAAGCATATCGCAGCTCGACAGAAGTTCCACAAAGTCCAGGAAGTGA 2697 0.4119 MESHEGDSPKPEGQFTDRSHHNHGSYGNLVLENGLSDENRCQVDPEDQLLQLAFELRFQNDFFKSQFEGFNSLNSVHNDSSMGKNVSGPEEVKSDIIEELQGRIQALNKELIDEKQMRGAAEEALKHLQLAYSDADGKALELSEKLAEAEKKLDQEIKEREEKYTELDTKFNRLHKRAKQRIQEVQKEKDDLEVQLREVNGKAEQASSQQSSLQQELERTRQQANEALKAMDGDRQQLRSANNKLRDTIEDLRRSLQPKESALEALQQSLAEKEQMIEDMRGLLQAADEKKQAALTELSAKHQKNMESLEAQLNDAISDRNKAAETISSLQVLVAEKETKIAEMEAASTGEAARLRAAVESVKGELSHLKQEHEKEKESWATAAQALKAKLEIAESNCIHAEIEVAKMRSQLESEVSAQTRILNMRDAELLSAKEEIGRLENEFSSYKVRAHSLLQKKDAELAAAKDSEQVKALEEALKEAENEVLSITEERDRALQDLQDSTKIHEKELTERDSALENFKEQIRSLEMKFDSVNAQHLKEKEAWGLSLQNVEETWRIKYEAMKAETEGSLAHDIQLRKELEELKQKYKRLKEEHDSFRDLADRMIQEKDSEISRLLHDNNNLHQSQQSTSLVDKHDYHSTDHFPSVLHNGDLLNLSPSSAEQQILLLARQQAQREEELARSQRHILALQEEIEELERENRLHSQQCPDLKPVILCLASNLLEELQILGSWPILAANYSFYEFVVFLAYPIFPIIHAMLKTELRNMERSQKREGVDMTYLKNVILKLLETGEVEALLPVIAMLLQFSPEEVMSSFYALLAFPMELCRKDHFKSLRCNRKVHDDFNLQNSLSQENPLNSPKSYAILVKETAECDSNASADAEVSTSISQLDRSSTKSRK 898
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele50g0036 898 Coils Coil 132 170 - -
Lele50g0036 898 ProSiteProfiles GRIP domain profile. 770 817 IPR000237 -
Lele50g0036 898 Coils Coil 423 450 - -
Lele50g0036 898 Coils Coil 97 124 - -
Lele50g0036 898 SMART 1grip 773 814 IPR000237 -
Lele50g0036 898 Coils Coil 352 411 - -
Lele50g0036 898 Pfam GRIP domain 774 810 IPR000237 -
Lele50g0036 898 MobiDBLite consensus disorder prediction 200 219 - -
Lele50g0036 898 MobiDBLite consensus disorder prediction 875 898 - -
Lele50g0036 898 Coils Coil 679 706 - -
Lele50g0036 898 PANTHER SYNAPTONEMAL COMPLEX PROTEIN-RELATED 130 810 - -
Lele50g0036 898 Coils Coil 574 608 - -
Lele50g0036 898 Coils Coil 510 537 - -
Lele50g0036 898 Gene3D - 151 313 - -
Lele50g0036 898 MobiDBLite consensus disorder prediction 1 19 - -
Lele50g0036 898 Coils Coil 175 347 - -
Lele50g0036 898 MobiDBLite consensus disorder prediction 201 219 - -
Lele50g0036 898 Coils Coil 457 498 - -
Lele50g0036 898 MobiDBLite consensus disorder prediction 1 31 - -
Lele50g0036 898 MobiDBLite consensus disorder prediction 876 891 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele50g0036 Lele-ChrLele50 255127 266694 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele50g0036 50 255127 266694 Lele51g0033 51 223322 238937 hybridization
Lele50g0036 50 255127 266694 Lele52g0038 52 247069 267212 hybridization