Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele49g0032 ATGGAAAGGCGTGAAGGAGATACTCCTAAACCTGAGGAGCAGTTCACTGACAGGGATCATAACAATCATGGAAGCTATGGAAATCTTGTTTTAGAAAATGACGTATCTGATGACAACCGCTGTCAAATTGATCCTGAGGATCAGCTTTTACAATTGGCCTTTGAACTTAGATTTCAGAATGATTTTTTGAAGTCTCAGTTTAAGGTTTTTAACAGTCTAAACAGTGTACATAATGACTCTAGTATGGGGAAAAATGTTAGTGGCCCCGAAGAAGTTAAATCTGATATCATTGCAGAACTGCAGGGAAGGATACAAGTATTAAATAAAGAACTTTTAGATGAAAAACAAACGAGAGGTGCAGCTGAAGAGGCTCTAAAGCATCTTCAATTGGCATACACAGAGGCAGATGCGAAAGCTCAAGAGCTGTCTGAAAAGCTCGCTGAAGCTGAAAAGAAGTTGGATCAAGAAATAAAAGAGCGTGAAGAAAAGTATACTGAACTTGATACAAAGTTTAATAGGCTTCACAAACGAGCAAAACAGCGCATTCAGGAGGTTCAGAAGGAAAAAGATGATCTTGAGATCCAATTGAGTGAGGTGAATGAAAAGGCTGAGCAAGCATCATCCCAGCAATCGTCATTGCAGCAAGAGTTAGATCGCACAAGGCAGCAAGCAAATGAGGCATTGAAGGCCATGGATGGGGACAGACAGCAGCTAAGAAGTGCAAATAACAAACTTCGCGATACCATTGAGGATTTGAGGCGATCATTGCAACCAAAGGAGAGTGCCCTTGAAGCATTGCAACAGTCACTTGCAGAAAAGGAACAGATGATAGAAGATGAGAGATGCTTGCTCCAGGCAGCTGATGAAAAGAAGCAAGCTGCACTGGCTGAGCTTTCAGCTAAACATCAGAAGAATATGGAGAGTTTGGAAGATCAACTTAACGATGCTATATCTGATAGAAATAAAGCAGCTGAAACTATTTCCTCACTGCAGGTGCTAGTTGCAGAGAAAGAGTCCAAGATTGCTGAGATGGAGGCAGCATCAACTGGGGAAGCTGCACGACTCAGAGCGGCTGTTGAAAGTATGAAGGGGGAGCTTTCTCACCTGAAACAGGAGCATGAGAAAGAAAAGGAAAGTTGGGCAACTGCAGCTCAGGCACTCAAGGCAAAACTTGAAATTGCGGAGAGCAACTGCATACATGCTGAAATTGAAGTAGCAAAAATGAGAAGTCAGCTGGAATCAGAAGTATCTGCACAAACCAGGATTCTCAACATGAGAGATGCAGAATTGTTGTCTGCCAAGGAAGAGATCAGCCGCCTTGAGAATGAATTTTCTTCCTACAAAGTTCGTGCTCACTCACTTCTTCAGAAGAAGGATGCAGAACTGGCAGCAGCCAAAGACTCTGAGCAAGTCAAAGCTCTTGAGGAAGCTTTAAAAGAGGTTGAAAATAAAGTATTATCAGTAACAGAAGAAAGGGATACAGCTCTTCAAGATCTTCAAGGTGCAACAATAATTCACGAGAAAGAACTCACAGAAAGAGACACAGCACTTGAAAATTTCAAGGAGCAAATAAAAAGTTTAGAAATGAAATTTGATTCTGATAATGCTCAGCACCTAAAAGAGAAAGAAGCATGGGGACTCAGCCTTCAAAATGTTGAAGAAACATGGCGAATTAAATATGAGGCCATGAAGGCTGAAACTGAAGGATTTTCGGCACATGATATGCAACTACGAAAGGAACTTGAAGAGCTCAAACAAAAGTACAAAAAATTGAAGGAAGAGCATGATTCTTTTCGTGATCTTACTGATAGAATGATTCAGGAGAAAGAGAACGAAATATCTAGACTTTTAGATGATAACAATAATCTTCATCAGTCCCAGCAATCAAGCTCATTGGTGGATCAACATGATTATTATAGCACAGATCATTCCTCTTCAGCCTTGCATAATGGGGATTTACTGAACCTAAGCCCCTCATCTGCAGAACAGCAAATTCTGCTTCTGGCTAGACAACAAGCCCAAAGAGAGGAAGAGCTGGCACGATCCCAGCGGCATATCTTGGTTCTTCAAGAAGAAATTGAAGAACTTGAACGTGAAAATCGTCTCCATAGCCAACAGGAAGCAATGTTAAAGACAGAACTTCGTAACATGGAAAGATCAAAAACGAGGGAAGGAGTAGATATGACCTATTTGAAAAATGTCATTTTAAAGCTTCTTGAGACAGGTGAAGTGGAGGCACTATTGCCAGTCATTGCGATGCTGCTTCAGTTTAGTCCAGAAGAGATGCAGAAGTGTCAACAAGCATATCGCAGCTCAACAGAAGTTCCACCAAGTCCAGGAAGTGAATCTTCGGGATCTGGCCTATCTCTTTTCTCAAGATTCTCATTTTCATAG 2394 0.4131 MERREGDTPKPEEQFTDRDHNNHGSYGNLVLENDVSDDNRCQIDPEDQLLQLAFELRFQNDFLKSQFKVFNSLNSVHNDSSMGKNVSGPEEVKSDIIAELQGRIQVLNKELLDEKQTRGAAEEALKHLQLAYTEADAKAQELSEKLAEAEKKLDQEIKEREEKYTELDTKFNRLHKRAKQRIQEVQKEKDDLEIQLSEVNEKAEQASSQQSSLQQELDRTRQQANEALKAMDGDRQQLRSANNKLRDTIEDLRRSLQPKESALEALQQSLAEKEQMIEDERCLLQAADEKKQAALAELSAKHQKNMESLEDQLNDAISDRNKAAETISSLQVLVAEKESKIAEMEAASTGEAARLRAAVESMKGELSHLKQEHEKEKESWATAAQALKAKLEIAESNCIHAEIEVAKMRSQLESEVSAQTRILNMRDAELLSAKEEISRLENEFSSYKVRAHSLLQKKDAELAAAKDSEQVKALEEALKEVENKVLSVTEERDTALQDLQGATIIHEKELTERDTALENFKEQIKSLEMKFDSDNAQHLKEKEAWGLSLQNVEETWRIKYEAMKAETEGFSAHDMQLRKELEELKQKYKKLKEEHDSFRDLTDRMIQEKENEISRLLDDNNNLHQSQQSSSLVDQHDYYSTDHSSSALHNGDLLNLSPSSAEQQILLLARQQAQREEELARSQRHILVLQEEIEELERENRLHSQQEAMLKTELRNMERSKTREGVDMTYLKNVILKLLETGEVEALLPVIAMLLQFSPEEMQKCQQAYRSSTEVPPSPGSESSGSGLSLFSRFSFS 797
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele49g0032 797 Gene3D - 90 259 - -
Lele49g0032 797 Coils Coil 423 450 - -
Lele49g0032 797 Coils Coil 352 411 - -
Lele49g0032 797 MobiDBLite consensus disorder prediction 200 221 - -
Lele49g0032 797 Pfam GRIP domain 725 764 IPR000237 -
Lele49g0032 797 ProSiteProfiles GRIP domain profile. 721 768 IPR000237 -
Lele49g0032 797 SMART 1grip 724 768 IPR000237 -
Lele49g0032 797 MobiDBLite consensus disorder prediction 1 20 - -
Lele49g0032 797 PANTHER SYNAPTONEMAL COMPLEX PROTEIN-RELATED 109 794 - -
Lele49g0032 797 MobiDBLite consensus disorder prediction 767 797 - -
Lele49g0032 797 Coils Coil 510 537 - -
Lele49g0032 797 Coils Coil 574 601 - -
Lele49g0032 797 Coils Coil 679 713 - -
Lele49g0032 797 Coils Coil 175 347 - -
Lele49g0032 797 Coils Coil 97 117 - -
Lele49g0032 797 Coils Coil 457 498 - -
Lele49g0032 797 Coils Coil 606 626 - -
Lele49g0032 797 Coils Coil 125 170 - -
Lele49g0032 797 MobiDBLite consensus disorder prediction 1 31 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele49g0032 Lele-ChrLele49 214875 224843 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele49g0032 49 214875 224843 Lele51g0033 51 223322 238937 hybridization
Lele49g0032 49 214875 224843 Lele52g0038 52 247069 267212 hybridization