Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele51g1330 ATGACGGACTCTTCTCTTTCATCCGCCTCCTCCGATTTCGGTTCCGTGAACACCTCCAATCAGAATGCGGGGAGGAGTCGGAGAAGTGGGGGCGTTAGTGAAGTCGTGATCGTGCAGCAGCAAACGCGTCGGTGGCATGACGTTTTCTGGTTAGGAATATTTTTGATTCATTTGATTGGCCTGGGGTTCCTTCTGGGGCTTGTCGGCCTCAATAGGTTTAAGAAGAAGAATAGACTTAATATTGATAGATATACTGCCCGGTTTTCGGAGAATAAAAACGGCTTGACCGAGGATTTCTGGCCTCTCTATGCTGTTGCCGGTGGAGTTGGGACTGTTCTTGGATGGAGTTGGTTGTTGTTGTTGGGTTCTCGGGGCGGTCAAATGATGAAGGTCTCGGTCCACATCCTGACCACTTATCTTGCAGTGATTAGTGTTTTGTGTTTCTGGGCTGAACAGTTTTTCTGGGGAGTCTTTTTTGCCATTGGGGCTGCTTTGCAGTTCTTGTACGTCATATCGGTCATAGACAGACTTCCATTTACCATGTTGGTTCTACAGAAGGCCGTGAAGATGGTGTGGAGTCTTCCTGAAGTCATGAGATTAGCATATGCATTTATGCTTGTTGTGCTCTTATGGATGGCCTTGTGGTCTTTTGGAGCAGCTGGAGTCGTGGCCTCAAGCATGGGTGATGGTGGACGCTGGTGGCTTCTTGTGGTTTTCTCTGTAAGCTTATTTTGGACTGGTGCAGTACTTTGTAATACAGTGCATGTTATTGTGTCTGGGATGGTGTTTCTTGTACTTATTCATGGTGGCAGAGAGGCAGCATCAATGCCAGCTAACGCTCTATTGAAATCTCTAAAGTATGCTTTAACTACATCTTTTGGCAGCATTTGTTATGGTTCATTATTTACAGCTGCTATTAGGACACTTCGTTGGAAGATAAGGGGATTTCGGTCAAAGATTGGAAAGAATGAGTGTTTACTTTGCTGTGTTGATTTCCTTTTTCATCTTGTGGAGACTCTTGTCCGTTTCTTCAACAAGTATGCCTATGTTCTGATTGCTGTTAATGGCAAAAATTTTAACCATTCTGCTAGAGATGCATGGGAGTTATTCCAGTCAACTGGTGTTGAAGCACTCGTAGCGTATGATTGTTCTGGAGCAGTCCTGCTAATGGGCATCATTTTTGGTGGGCTGATTACTGGAACTTGCTCTGGTGTTTGGGCATGCTTCAAATGGAGTGATAGAGTACTTATGATTGGGTCCACGTCTATGTTGATGGGAATGGTCTTGGTAGGAGTGGCAATGGTAGTGGTTGAAAGTGCTGTTACATCCATTTATATCTGCTATGCAGAAGACCCCTTGTTGATTCGCAGATGGGACACGGAATTTTTCAACCAGATGTCTGAGACACTACATCAGCGACTTCAACATCGAAGTTCACGAGCTAGCGAGGTTAGAATGTTATATCGGCTTGATGGGCTGGTTCAAGAAAATGGTTCAATTTGA 1503 0.4484 MTDSSLSSASSDFGSVNTSNQNAGRSRRSGGVSEVVIVQQQTRRWHDVFWLGIFLIHLIGLGFLLGLVGLNRFKKKNRLNIDRYTARFSENKNGLTEDFWPLYAVAGGVGTVLGWSWLLLLGSRGGQMMKVSVHILTTYLAVISVLCFWAEQFFWGVFFAIGAALQFLYVISVIDRLPFTMLVLQKAVKMVWSLPEVMRLAYAFMLVVLLWMALWSFGAAGVVASSMGDGGRWWLLVVFSVSLFWTGAVLCNTVHVIVSGMVFLVLIHGGREAASMPANALLKSLKYALTTSFGSICYGSLFTAAIRTLRWKIRGFRSKIGKNECLLCCVDFLFHLVETLVRFFNKYAYVLIAVNGKNFNHSARDAWELFQSTGVEALVAYDCSGAVLLMGIIFGGLITGTCSGVWACFKWSDRVLMIGSTSMLMGMVLVGVAMVVVESAVTSIYICYAEDPLLIRRWDTEFFNQMSETLHQRLQHRSSRASEVRMLYRLDGLVQENGSI 500
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele51g1330 500 MobiDBLite consensus disorder prediction 1 27 - -
Lele51g1330 500 Pfam Plasma-membrane choline transporter 157 452 IPR007603 GO:0022857|GO:0055085
Lele51g1330 500 PANTHER CHOLINE TRANSPORTER-LIKE (SLC FAMILY 44) 38 480 IPR007603 GO:0022857|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele51g1330 Lele-ChrLele51 9033070 9036439 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele51g1330 51 9033070 9036439 Lele51g1330 51 9033070 9036439 ECH
Lele49g1323 49 9064518 9068281 Lele51g1330 51 9033070 9036439 hybridization
Lele50g1504 50 20203137 20207432 Lele51g1330 51 9033070 9036439 hybridization