Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele51g1251 ATGGCTATTCCTTATCCCCATTTCATTGCGTCAGAGAAAGCAGCCATAGAGGCGGGTCTTTTGTTGCCTTCGTGTCCATCGTCGTCCCTATCTCCTCCTCCTGTGATTCTAACGCAGGACGATTTGAAGAAAATCGCCGCCTACAAAGCCGTTGAGTACGTTGAATGCGGCATGGTTCTGGGTTTGGGAACCGGGTCCACGGCGAAGCACGCAGTGGACCGAATCGGCGAGCTTTTGCGTCAAGGCAAGCTCAAGAACATTGTAGGAATACCCACGTCGAAGAAGACTCACGAGCAGGCGGTCTCATTGGGGATTCCGTTGTCCGATCTCGATTCGCACCCAACCTTGGATCTAGCGATTGACGGAGCAGATGAAGTTGATCCGTTTTTGAACTTAGTGAAAGGGCGAGGTGGGTCGCTTCTGAGAGAGAAAATGGTAGAGGGTGCTTGCAAGAAGTTCGTTGTGATTGTGGATGAGTCCAAGTTGGTGAATTATTTGGGAGGTAGTGGGCTGGCTATGCCTGTTGAGATTATACCCTTTTGTTGGAAATTCACTGCTGCCAGGCTTCAAAAATTGTTTGAGGAGTCAGGTTGTGTTGCTAAGTTGAGGACTTCTGGAGAGAAAGATCAACCATTTGTAACTGATAACGGAAATTACATTGTAGACTTGTACCTTAAGAAGAGTATTGGGGATCTGAAGGTTGCCAGTGATGCAATTCTTCAGCTTGCTGGCGTTGTGGAGCACGGAATGTTTCTGGACATGGCCACTACAGTCATTATTGCAGGTGAACTTGGGATAACCATTAAGAATAAGTAG 816 0.4779 MAIPYPHFIASEKAAIEAGLLLPSCPSSSLSPPPVILTQDDLKKIAAYKAVEYVECGMVLGLGTGSTAKHAVDRIGELLRQGKLKNIVGIPTSKKTHEQAVSLGIPLSDLDSHPTLDLAIDGADEVDPFLNLVKGRGGSLLREKMVEGACKKFVVIVDESKLVNYLGGSGLAMPVEIIPFCWKFTAARLQKLFEESGCVAKLRTSGEKDQPFVTDNGNYIVDLYLKKSIGDLKVASDAILQLAGVVEHGMFLDMATTVIIAGELGITIKNK 271
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele51g1251 271 Hamap Ribose-5-phosphate isomerase A [rpiA]. 39 269 IPR020672 GO:0004751|GO:0009052
Lele51g1251 271 Gene3D - 42 263 - -
Lele51g1251 271 FunFam Ribose-5-phosphate isomerase A 42 175 - -
Lele51g1251 271 Pfam Ribose 5-phosphate isomerase A (phosphoriboisomerase A) 88 263 IPR004788 GO:0004751|GO:0009052
Lele51g1251 271 TIGRFAM rpiA: ribose 5-phosphate isomerase A 42 265 IPR004788 GO:0004751|GO:0009052
Lele51g1251 271 Gene3D - 165 249 - -
Lele51g1251 271 PANTHER RIBOSE-5-PHOSPHATE ISOMERASE 3, CHLOROPLASTIC-RELATED 30 270 - -
Lele51g1251 271 SUPERFAMILY NagB/RpiA/CoA transferase-like 38 222 IPR037171 -
Lele51g1251 271 Coils Coil 268 271 - -
Lele51g1251 271 CDD RPI_A 42 262 IPR004788 GO:0004751|GO:0009052
Lele51g1251 271 SUPERFAMILY D-ribose-5-phosphate isomerase (RpiA), lid domain 171 252 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele51g1251 Lele-ChrLele51 8287848 8288663 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele51g1251 51 8287848 8288663 Lele51g1251 51 8287848 8288663 ECH
Lele49g1234 49 8265161 8265976 Lele51g1251 51 8287848 8288663 hybridization
Lele50g1598 50 21068513 21073159 Lele51g1251 51 8287848 8288663 hybridization