Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele51g1240 ATGACTAAAGACGACGACTTTAAGCTCCTCAAAATCCAGACATGTGTTCTCAAAGTGAACATTCACTGTGATGGGTGTAAACAGAAAGTGAAGAAACTACTTCAGAAAATTGAAGGTGTTTATCAGGTTCAGTTAGATGCAGAACAACAGAAAGTGACAGTTTCAGGAAGTGTTGATTCTGCAACATTGATTAAGAAACTGGTTAGAGCTGGGAAATATGCTGAACTTTGGTCGCAGAAATCAAATCAGAACCAGAAGCAGAATAATAACAACATCAGCAATAATAACAACAACTTTGTGAAGAATAATGACAATAACCAGAAGGGTCAAAAGCAACAAGGACAGATTAACAAGGGGCTTGAAGCATTAAACAACAACCAGCAGAAGTTTAAATTCCCTGCTTTTAGTTCTGAAGATGATGAGTTGTACGAAGACGACGATGAAGATGAAGAAGACTGTGAAGATGATGATGGGCTAAGGTTCATCAGTGCGAAGGCTAATCAACTGAATTTGATCAAGCAGCAGCAGCAAGCAGCTAGTGCTGCAAAGAATGCAAAGAAAAATGCAGGAGCCATTAATCCAGCTGCTTCTTTCAACAATGGTGGCAAGGCAAACAATAACAATAATAATGCCAAGAAAGTAAGCTTTGACCCAAAATCCATGGCTGCTCTGAAAGTAAACTGTAATGCCAATATGGGAAGTGAAAGTCTGAATCTTGGAGAACAACCCAGAAGGGTTACAAATGACATAGGTTCTATGATGAGTCTTGCTGGTTTTAATGGAAATAACAACGCTGCAAACAATTCTGGATTTGGAGGATTTCAAGTTCAGTCCAACAATGGAATCATCCCAAATGGAGGTTTTCTCACAAATCAGCAATACCCATCACCATCTTCATCTCCATCTTCTTTTCTGATGAACATGAATGGTTTTAGTAATAATAATCATCCATCTTCATTGATGATGAACTTGAAGCAGCAACAACAACCCCCCCAGGTGATGTATCAGAGAGCTCCATTAGTTCCTCCTAGCTCTGGATATTACTGGAACAACAGCTACAACTATAATTATGATAATTACAGTGCTGCCATTCCCAGTTACTCTCATCTTCATCAGCTACCTAATTACTGTGGGGAAGATCACTATGCAGCTGATATGTTCAGTGATGACAACACTAACAGCAACTGTTCAGTTATAAAAAAGAGTCTATATTGGGTTCTTCTCAACATATCTCTTCAGTGTTGTGTTTCTGATGCTTTGAATTTCTAA 1269 0.3861 MTKDDDFKLLKIQTCVLKVNIHCDGCKQKVKKLLQKIEGVYQVQLDAEQQKVTVSGSVDSATLIKKLVRAGKYAELWSQKSNQNQKQNNNNISNNNNNFVKNNDNNQKGQKQQGQINKGLEALNNNQQKFKFPAFSSEDDELYEDDDEDEEDCEDDDGLRFISAKANQLNLIKQQQQAASAAKNAKKNAGAINPAASFNNGGKANNNNNNAKKVSFDPKSMAALKVNCNANMGSESLNLGEQPRRVTNDIGSMMSLAGFNGNNNAANNSGFGGFQVQSNNGIIPNGGFLTNQQYPSPSSSPSSFLMNMNGFSNNNHPSSLMMNLKQQQQPPQVMYQRAPLVPPSSGYYWNNSYNYNYDNYSAAIPSYSHLHQLPNYCGEDHYAADMFSDDNTNSNCSVIKKSLYWVLLNISLQCCVSDALNF 422
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele51g1240 422 FunFam Copper transport protein ATOX1 11 80 - -
Lele51g1240 422 MobiDBLite consensus disorder prediction 193 214 - -
Lele51g1240 422 MobiDBLite consensus disorder prediction 132 155 - -
Lele51g1240 422 MobiDBLite consensus disorder prediction 192 214 - -
Lele51g1240 422 SUPERFAMILY HMA, heavy metal-associated domain 12 78 IPR036163 GO:0046872
Lele51g1240 422 PANTHER HEAVY METAL-ASSOCIATED ISOPRENYLATED PLANT PROTEIN 33-RELATED 7 398 - -
Lele51g1240 422 CDD HMA 16 75 IPR006121 GO:0046872
Lele51g1240 422 MobiDBLite consensus disorder prediction 139 155 - -
Lele51g1240 422 MobiDBLite consensus disorder prediction 80 113 - -
Lele51g1240 422 ProSiteProfiles Heavy-metal-associated domain profile. 20 76 IPR006121 GO:0046872
Lele51g1240 422 Pfam Heavy-metal-associated domain 17 70 IPR006121 GO:0046872
Lele51g1240 422 Gene3D - 12 84 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele51g1240 Lele-ChrLele51 8201933 8204004 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele51g1240 51 8201933 8204004 Lele51g1240 51 8201933 8204004 ECH
Lele49g1222 49 8179913 8186921 Lele51g1240 51 8201933 8204004 hybridization
Lele50g1612 50 21169392 21173991 Lele51g1240 51 8201933 8204004 hybridization