Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele51g1225 ATGATTACTTGGAAAGATCTCTACACAGTTCTGTCGGCGATGGTGCCACTGTACGTGGCCATGATTCTAGCCTACGGCTCTGTCCGGTGGTGGAAGATATTCTCGCCGGACCAGTGCTCTGGCATCAACCGGTTCGTCGCGATCTTTGCCGTCCCTCTACTCTCATTCCATTTCATCTCAATCAACAATCCGTACAAAATGAATTTGCGCTTCATCGCCGCCGATACACTCCAGAAGATCATCATGCTCGTCGCGCTCGCAATCTGGACAAACTTCACCAAGACCGGAAGTCTCGATTGGATGATCACTATTTTCTCGCTGTCCACATTGCCGAACACTCTCGTGATGGGGATTCCTCTATTGATCGCCATGTACGGAGAGTACTCCGGCAGCCTCATGATTCAGGTGGTGGTTTTACAGTGCATCATCTGGTACACGCTCTTGCTGTTTCTTTTTGAGTATCGTGGCGCCAAGCTTCTGATCATGGAGCAGTTCCCGGAGACTGCGGCGTCCATCGTGTCGTTCAAGGTCGACTCTGACGTGGCCTCGCTAGACGGCCGGGACTTCCTCGAGACTGACGCAGAGATTGGAGACGACGGGAAGCTTCACGTGACAGTGAGAAAGTCCAACGCGTCGAGGAGGTCGTTCATGATGACTCCCCGACCATCGAACCTCACCGGTGCTGAGATTTACAGCCTGAGCTCTTCTCGGAATCCGACGCCGAGAGGATCCAATTTCAACCCCGCAGATTTCTACTCAATGATGGGGTACCCGTCGGGACCAAGACATTCAAACTTCACCGGCTCGATGGAGCTGCACTCCGTTCAACCAACGAGACCATCGAATTTTGAAGAAAACTGCCCAATTCCAATGGCAGCTCAGGCCACGAACTCTCCTCGGATGGGATTCTATCCTGTACAAGAACAGCCATCTTCTTACCCAGCGCCAAATCCAGAATTCTCATCATCCAACTTAAGCTCCAGAAGTCTGAAACAACAAAATCAAGATCCTGCTCCGAACAGTACGAACAAAGCAAGTCATGACGCTAAAGAGCTTCACATGTTTGTGTGGAGCTCAAGCGCTTCGCCCGTCTCAGAACGCGGAGGCAGCGGCGCCGGACTGCATGTATTTGGCGGTGGCTCCGAGGATCAATCCGGACGCTCCGATCAGGGGGCCAAAGAAATTCGGATGCTGGTGGCCGATGACCATCATCACCCTCATCAAAATGGGGAATTAAACAAAGATATTCCAGATGCAGAGTTTGGAGGGGAAGAGTTGAAGCTAGTGGGGAAGGGAGGAGAAGAAGCAGAAGCAGTAGCAGCAGCAGGGGAAGAAGAGAAAGAGAAAGAGGAGTCCACTGGACTGAACAAGCTGGGATCGAGTTCAACAGCGGAGCTACAACCGAAGGGCGGCGGATTGATGGAGTCCGGCGTTGGAAAACAAATGCCGCCGGCGAGTGTGATAACGCGTCTCATACTGATCATGGTGTGGCGGAAGCTTATCCTCAACCCCAACACATACTCCAGCCTCATTGGCGTGATTTGGTCCCTCATTGCCTTCAGGTGGCATGTGGAGATGCCGAAAATAATAGAGAAGTCAATCTCTATCCTGTCGGATGCAGGTCTTGGAATGGCTATGTTCAGTTTGGGTCTGTTCATGGCTCTTCAACCAAAAATCATTGCATGTGGAAACTCCGTTGCCGCCTTTGCCATGGCTATTCGGTTCCTTACCGGGCCGGTAGTGATGGCGGCGGCCTCCATCACCGTCGGCCTCCGTGGTGATCTTCTTCGTGTAGCCATTGTTCAGGCTGCACTTCCACAAGGTATTGTTCCCTTTGTGTTTGCCAAAGAGTACAACGTCCATCCCGCCATTCTCAGCACAGCGGTTATATTTGGAATGCTAATAGCACTACCAATTACTCTAGTCTACTACATTCTTCTTGGTCAAGTGATGATGACAGAGAAAGAAGGTTTGAGAATTCGGCTATGGGTCGATGGTGCTGGAGACAAAGGGAATGATATTGGAATTGAAGAATTCTGCAATTATTTGCGTTTGTCTTCTTTCTTGCTTTTGATAACGTAA 2082 0.5072 MITWKDLYTVLSAMVPLYVAMILAYGSVRWWKIFSPDQCSGINRFVAIFAVPLLSFHFISINNPYKMNLRFIAADTLQKIIMLVALAIWTNFTKTGSLDWMITIFSLSTLPNTLVMGIPLLIAMYGEYSGSLMIQVVVLQCIIWYTLLLFLFEYRGAKLLIMEQFPETAASIVSFKVDSDVASLDGRDFLETDAEIGDDGKLHVTVRKSNASRRSFMMTPRPSNLTGAEIYSLSSSRNPTPRGSNFNPADFYSMMGYPSGPRHSNFTGSMELHSVQPTRPSNFEENCPIPMAAQATNSPRMGFYPVQEQPSSYPAPNPEFSSSNLSSRSLKQQNQDPAPNSTNKASHDAKELHMFVWSSSASPVSERGGSGAGLHVFGGGSEDQSGRSDQGAKEIRMLVADDHHHPHQNGELNKDIPDAEFGGEELKLVGKGGEEAEAVAAAGEEEKEKEESTGLNKLGSSSTAELQPKGGGLMESGVGKQMPPASVITRLILIMVWRKLILNPNTYSSLIGVIWSLIAFRWHVEMPKIIEKSISILSDAGLGMAMFSLGLFMALQPKIIACGNSVAAFAMAIRFLTGPVVMAAASITVGLRGDLLRVAIVQAALPQGIVPFVFAKEYNVHPAILSTAVIFGMLIALPITLVYYILLGQVMMTEKEGLRIRLWVDGAGDKGNDIGIEEFCNYLRLSSFLLLIT 693
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele51g1225 693 MobiDBLite consensus disorder prediction 313 345 - -
Lele51g1225 693 MobiDBLite consensus disorder prediction 360 390 - -
Lele51g1225 693 TIGRFAM 2a69: auxin efflux carrier 1 648 IPR014024 -
Lele51g1225 693 MobiDBLite consensus disorder prediction 434 454 - -
Lele51g1225 693 PANTHER AUXIN EFFLUX CARRIER COMPONENT 1B-RELATED 1 648 - -
Lele51g1225 693 MobiDBLite consensus disorder prediction 434 478 - -
Lele51g1225 693 MobiDBLite consensus disorder prediction 301 347 - -
Lele51g1225 693 Pfam Membrane transport protein 9 644 IPR004776 GO:0016020|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele51g1225 Lele-ChrLele51 8069344 8073517 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele51g1225 1 648 Organic Solute Cotransporters AT1G70940 73.284 0.0 916
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele51g1225 51 8069344 8073517 Lele51g1225 51 8069344 8073517 ECH
Lele49g1204 49 8007610 8010858 Lele51g1225 51 8069344 8073517 hybridization
Lele50g1637 50 21433624 21436804 Lele51g1225 51 8069344 8073517 hybridization