Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele49g1204 ATGGTGCCACTGTATGTGGCCATGATTCTAGCCTACGGCTCTGTCCGATGGTGGAAGATATTCTCGCCGGACCAGTGCTCCGGCATCAACCGGTTCATCGCGATCTTTGCCGTCCCTCTTCTCTCATTCCATTTCATCTCAATCAACAATCCGTACGAAATGAATTTGCGCTTCATCGCCGCCGATACACTACAGAAGATAATCATGCTCGTCGCGCTCGCAATCTGGACAAACTTCACCAAGACCGGAAGTCTCGATTGGATGATCACTATTTTCTCGTTGTCCACATTGCCGAACACTCTCGTGATGGGGATTCCTCTATTGATCGCCATGTACGGAGAGTACTCCGGCAGCCTCATGATTCAGGTGGTGGTTTTACAGTGCATCATCTGGTACACGCTCTTGCTGTTTCTCTTTGAGTATCGTGGCGCCAAGCTTCTGATCATGGAGCAGTTCCCGGAGACTGCGGCGTCCATCGTGTCGTTCAAGGTCGACTCTGATGTGGTCTCGCTAGACGGCCGGGACTTCCTCGAGACTGATGCAGAGATTGGAGACGACGGGAAGCTTCACGTGACGGTGAGAAAGTCCAACGCTTCGAGGAGGTCGTTCATGATGACTCCCCGACCATCGAACCTCACCGGTGCTGAGATTTACAGCCTGAGCTCTTCTCGGAATGCGACGCCGAGAGGATCCAATTTCAACCACGCAGATTTCTACTCAATCATGGGGTACCCGTCGGGACCAAGACATTTAGACGTCACCGGCTCGATGGAGCTGCACTCCGTTCAACCATCCAGATCATCGAATTTTGAAGAAAACTGCCCAATTCCTATGGCAGCTCAGGCCACGAACTCTCCTGGGATGGGATTCTATCCTGTACAACAACAGCCATCTTCGTACCCAGCACCAAATCCAGAATTCTCATCATCCAACTTAAGCTCCAGAAGTCTGAAACAACAAAATCAAGCTCCTGCTCGGAACAGTACGAACAAAGCAAGTCATGACGCTAAAGAGCTTCACATGTTTGTGTGGAGCTCAAGCGCTTCGCCCGTCTCAGAACGCGGCGGCAGCGGCGCCGGACTGCATGTATTTGGTGAAGGCTCCGAGGATCAATCCGGACGCTCCGATCAGGGGGGCAGAGAAATTCGGATGCTGGTGGCCAATGACCATCATCACCCTCATCAAAATGGGGAATTAAACAAAGATATTCCAGATGCAGAGTTTGGAGGGGAAGAGTTGAAGCTAGTGGGGAAGGGAGGAGAAGAAGCAGAAGCAGCAGCAGGGGAAGAAGAGAAACGGAGAGAGAAAGAGAAAGAGGAGTCCACTGGACTGAACAAGCTGGGATCGAGTTCAACAGCGGAGCTACAACCGAAGGGCGGTGGATTGACGGAGTCCGGCGTTGGAAAACAAATGCCGCCGGCGAGTGTGATAACGCGTCTCATACTGATCATGGTGTGGCGGAAGCTTATACTCAACCCCAACACATACTCTAGCCTCATTGGCGTGATTTGGTCCCTCATTGCCTTCAGGTGGCATGTGGGGATGCCCAAAATAATAGAGAAGTCAATCTCTATCCTGTCGGATGCGGGTCTTGGAATGGCTATGTTCAGTTTGGGTCTGTTCATGGCTCTTCAACCAAAAATCATTGCATGTGGAAACTCCGTTGCCGCCTTTGCCATGGCTATTCGGTTCCTTACCGGACCGGTAGTGATGGCAGCGGCTTCCATTGCCATCGGCCTCCGTGGTGATCTTCTTCGTGTAGCCATTGTTCAGGCTGCCCTTCCACAAGGTATTGTTCCCTTTGTGTTTGCCAAAGAGTACAACGTCCATCCCGCCATTCTCAGCACAGCGGTTATATTTGGAATGCTAATAGCACTACCGATTACTCTAGTCTACTACATTCTCCTTGGTTTGTAG 1917 0.5128 MVPLYVAMILAYGSVRWWKIFSPDQCSGINRFIAIFAVPLLSFHFISINNPYEMNLRFIAADTLQKIIMLVALAIWTNFTKTGSLDWMITIFSLSTLPNTLVMGIPLLIAMYGEYSGSLMIQVVVLQCIIWYTLLLFLFEYRGAKLLIMEQFPETAASIVSFKVDSDVVSLDGRDFLETDAEIGDDGKLHVTVRKSNASRRSFMMTPRPSNLTGAEIYSLSSSRNATPRGSNFNHADFYSIMGYPSGPRHLDVTGSMELHSVQPSRSSNFEENCPIPMAAQATNSPGMGFYPVQQQPSSYPAPNPEFSSSNLSSRSLKQQNQAPARNSTNKASHDAKELHMFVWSSSASPVSERGGSGAGLHVFGEGSEDQSGRSDQGGREIRMLVANDHHHPHQNGELNKDIPDAEFGGEELKLVGKGGEEAEAAAGEEEKRREKEKEESTGLNKLGSSSTAELQPKGGGLTESGVGKQMPPASVITRLILIMVWRKLILNPNTYSSLIGVIWSLIAFRWHVGMPKIIEKSISILSDAGLGMAMFSLGLFMALQPKIIACGNSVAAFAMAIRFLTGPVVMAAASIAIGLRGDLLRVAIVQAALPQGIVPFVFAKEYNVHPAILSTAVIFGMLIALPITLVYYILLGL 638
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele49g1204 638 MobiDBLite consensus disorder prediction 278 334 - -
Lele49g1204 638 MobiDBLite consensus disorder prediction 287 330 - -
Lele49g1204 638 MobiDBLite consensus disorder prediction 416 468 - -
Lele49g1204 638 Pfam Membrane transport protein 1 633 IPR004776 GO:0016020|GO:0055085
Lele49g1204 638 MobiDBLite consensus disorder prediction 444 458 - -
Lele49g1204 638 PANTHER AUXIN EFFLUX CARRIER COMPONENT 1B-RELATED 1 638 - -
Lele49g1204 638 Coils Coil 420 440 - -
Lele49g1204 638 TIGRFAM 2a69: auxin efflux carrier 1 638 IPR014024 -
Lele49g1204 638 MobiDBLite consensus disorder prediction 348 377 - -
Lele49g1204 638 MobiDBLite consensus disorder prediction 416 443 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele49g1204 Lele-ChrLele49 8007610 8010858 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele49g1204 1 638 Organic Solute Cotransporters AT1G70940 71.970 0.0 883
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele49g1204 49 8007610 8010858 Lele49g1204 49 8007610 8010858 ECH
Lele49g1204 49 8007610 8010858 Lele51g1225 51 8069344 8073517 hybridization
Lele49g1204 49 8007610 8010858 Lele52g1591 52 19820857 19824221 hybridization