Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele50g1637 ATGATTACTTGGAAAGATCTCTACACTGTTCTTTCGGCCATGGTGCCACTGTATGTGGCCATGATTCTAGCCTACGGCTCCGTCCGATGGTGGAAGATATTCTCGCCGGACCAGTGCTCCGGCATCAACCGGTTCGTCGCGATCTTCGCGGTGCCTCTTCTCTCATTCCATTTCATCTCAATCAACAATCCGTACGAAATGAATTTGCGCTTCATCGCCGCCGATACACTCCAGAAGATCATCATGCTCGTCGCGCTCGCCTTCTGGACGAACTTCACCAAGACTGGAAGTCTCGATTGGATGATTACTATTTTCTCGCTGTCCACATTGCCGAACACTCTGGTGATGGGGATTCCATTATTGATCGCCATGTACGGAAAGTACTCCGGCGGCCTCATGATTCAGGTGGTGGTGTTACAGTGCATCATCTGGTACACGCTCTTGCTGTTTCTCTTTGAGTATCGCGGCGCCAAGCTGTTGATTATGGAGCAGTTCCCGGAGACTGCGGCGTCCATCGTGTCGTTCAAGGTGGACTCCGATGTGGTCTCGCTCGACGGCCGGGACTTCCTCGAGACTGACGCAGAGGTCGGAGACGACGGGAAGCTTCACGTGACGGTGAGAAAGTCCAACGCGTCGAGGAGGTCGTTCATGATGACTCCCCGACCGTCGAACCTCACCGGTGCTGAGATTTACAGCCTGAGCTCTTCTCGGAATCCGACGCCAAGAGGATCCAATTTCAACCACGCTGATTTCTACTCAATGATGGGGTACCCGTCAGGACCAAGACATTCAAACGTCACCGGCTCGGCGGAGCTACACTCCGTTCAACCATCGAGACCATCAAATTTTGAAGAAAACTGCCCAATTCCAATGGCAGCTCCGGCCACGAACTCTCCTCGGATGGGATTTTATCCCGCACAACAGCAGCCATCTTCGTACCCAGCGCCAAATCCAGAATTCTCATCATCCAACTTAAGCTCCAGAAGTCTTAAACAACAAAATCAAGCTCCTGCTCTCAACAGTACGAGCAAAGCAAGTCATGACGCTAAAGAGCTTCACATGTTTGTGTGGAGCTCAAGCGCTTCGCCCGTCTCAGAACGCGGCGGCAGCGGTGCCGGACTGCATGTATTTGGCGGTGGCTCCGAGGATCAATCCGGACGCTCCGATCAGGGTGCCAAAGAAATTCGGATGCTGGTGGCCGATGACCAACACCCCCATCAAAATGGGGAATTAAGCAAAGATATTCCAGATGCAGATTTTGGAGGGGAAGAGTTGAAGCTAGGGGGGAAGGGAGTAGAAGAAGCAGAAGCAGTAGCAGGGGAAGAAGATAGAGAGAGAGAGGGATCTACTGGACTGAACAAGCTGGGATCGAGTTCAACAGCGGAGCTACAACCGAAGGGCAACGGATTGATGGAGTCCGGCATCGGAAAACAAATGCCGCCGGCGAGTGTGATCACGCGTCTCATACTGATCATGGTGTGGCGGAAACTTATCCGCAACCCCAATACTTACTCCAGCCTGATTGGCGTGATTTGGTCCCTCATTGCCTTCAGGTGGCATGTGGAGATGCCGAAAATAATAGAGAAGTCAATCTCAATCCTGTCGGATGCAGGTCTTGGAATGGCTATGTTCAGTTTGGGTCTGTTCATGGCTCTTCAACCAAAAATCATTGCATGCGGAAACTCCGTTGCCACCTTTGCCATGGCTATTAGGTTCCTCACCGGCCCGGCAGTGATGGCAGCAGCCTCCATCGCCATTGGCCTCCGTGGCGATCTTCTCCGTGTAGCCATTGTTCAGGCTGCACTTCCACAAGGTATTGTTCCCTTCGTGTTTGCCAAAGAGTACAACGTCCATCCAGCCATTCTCAGCACAGCGGTTATATTTGGAATGCTAATAGCACTACCAATTACCCTAGTATATTACATTCTTCTCGGCTTGTAG 1941 0.5188 MITWKDLYTVLSAMVPLYVAMILAYGSVRWWKIFSPDQCSGINRFVAIFAVPLLSFHFISINNPYEMNLRFIAADTLQKIIMLVALAFWTNFTKTGSLDWMITIFSLSTLPNTLVMGIPLLIAMYGKYSGGLMIQVVVLQCIIWYTLLLFLFEYRGAKLLIMEQFPETAASIVSFKVDSDVVSLDGRDFLETDAEVGDDGKLHVTVRKSNASRRSFMMTPRPSNLTGAEIYSLSSSRNPTPRGSNFNHADFYSMMGYPSGPRHSNVTGSAELHSVQPSRPSNFEENCPIPMAAPATNSPRMGFYPAQQQPSSYPAPNPEFSSSNLSSRSLKQQNQAPALNSTSKASHDAKELHMFVWSSSASPVSERGGSGAGLHVFGGGSEDQSGRSDQGAKEIRMLVADDQHPHQNGELSKDIPDADFGGEELKLGGKGVEEAEAVAGEEDREREGSTGLNKLGSSSTAELQPKGNGLMESGIGKQMPPASVITRLILIMVWRKLIRNPNTYSSLIGVIWSLIAFRWHVEMPKIIEKSISILSDAGLGMAMFSLGLFMALQPKIIACGNSVATFAMAIRFLTGPAVMAAASIAIGLRGDLLRVAIVQAALPQGIVPFVFAKEYNVHPAILSTAVIFGMLIALPITLVYYILLGL 646
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele50g1637 646 MobiDBLite consensus disorder prediction 361 390 - -
Lele50g1637 646 MobiDBLite consensus disorder prediction 301 345 - -
Lele50g1637 646 MobiDBLite consensus disorder prediction 262 283 - -
Lele50g1637 646 MobiDBLite consensus disorder prediction 435 450 - -
Lele50g1637 646 MobiDBLite consensus disorder prediction 451 466 - -
Lele50g1637 646 Pfam Membrane transport protein 9 641 IPR004776 GO:0016020|GO:0055085
Lele50g1637 646 MobiDBLite consensus disorder prediction 262 346 - -
Lele50g1637 646 PANTHER AUXIN EFFLUX CARRIER COMPONENT 1B-RELATED 1 646 - -
Lele50g1637 646 TIGRFAM 2a69: auxin efflux carrier 1 646 IPR014024 -
Lele50g1637 646 MobiDBLite consensus disorder prediction 435 475 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele50g1637 Lele-ChrLele50 21433624 21436804 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele50g1637 1 646 Organic Solute Cotransporters AT1G70940 74.213 0.0 924
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele50g1637 50 21433624 21436804 Lele50g1637 50 21433624 21436804 ECH
Lele50g1637 50 21433624 21436804 Lele51g1225 51 8069344 8073517 hybridization
Lele50g1637 50 21433624 21436804 Lele52g1591 52 19820857 19824221 hybridization