Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele51g1154 ATGGCGGATCCGTTCTCAGTGATTCCTGCTGCAGTGCTTCGCAACCTTGCTGACAAGCTCTACGAGAAGCGCAAGAATGCTGCTCTTGAGGTTGAGGGAATAGTGAAGCAGCTTGCTGCTAATTCAGAAACTGATAAAATAACGGCTGTGATCAATATGTTGACTACGGAATATACTGGTTCGGTACAAGCAAATCACCGCAAGGGAGGATTGATAGGATTAGCTGCTGCAACTGTTGGGTTGTCTACTGAAGCATCTCGGTATCTTGAGCAAATTGTCCCCCCTGTGTTAGGTGCTTTTGCTGATCCAGACAATAGAGTTCGTTATTATGCTTGTGAAGCACTGTATAATATTGCTAAGGTTGTAAGAGGGGAATTTATTGTATTCTTCAATCAGATCTTTGATGCCTTATGCAAGCTTGCTGCAGACTCAGATCCAAGTGTACAAAGTGCCGCTCATCTCCTAGATAGGCTTGTGAAGGATATTGTGACTGAAAGTGATCAGTTCAGTATTGAAGAGTTTATACCATTGTTGAGGGAGCGTATGAATGTCTTGAGTCCATATGTTCGTCAATTTTTGGTTGGATGGATTACTGTATTGGATAGTGTCCCTGATATTGACATGCTGGGTTTTCTTCCTGATTTTCTTGACGGTTTGTTTAATATGTTGAGTGATTCAAGTCATGAAATCCGTCAGCAAGCTGATTCAGCTCTTTCTGAGTTTCTTCAAGAGATTAAAAACTCCCCATCTGTAGATTATGGTCGAATGGCTGAAATACTGGTACAGAGGGCAGGTTCTCCAGATGAGTTTACTAGATTAACAGCTATCACATGGATAAATGAGTTTGTTAAGCTTGGTGGCGACCAACTTTTTCCATATTATGCTGATATTCTTGGAGCCATTTTGCCTTGTGTATCTGATCAAGAAGAGAAAATTAGAGCTGTTGCTCGTGAAACCAACGAAGAGCTATGTGCAATCAAGGCTGATCCAGCTGAATCGTTCGATGTAGGAGCTGTTCTCTCCATTGCTAGGAGGCAGCTATCTAGTGAATGGGAGGCTACCCGGATTGAAGCTTTGCATTGGATATCAACCCTTTTAAACAGATACGGTGCTGAGGTTTTAACATTTCTGAATGACATATTTGACACCCTACTGAAAGCACTTTCTGATCCATCTGATGAGGTTGTACTTCTAGTTCTTGAAATTCATGCATGCATTGCTAAAGATCCTCAGCACTTCCGACAATTTCTTGTTTTCCTAGTCCACAATTTCCGTGTGGATAATTCCCTTTTAGAGAAGCGCGGTGCTTTGATAATTCGTCGACTTTGTGTGCTTTTAGATGCTGAAAGAGTCTACCGGGAACTATCTACAATACTTGAAGGAGAATCTGATCTAGATTTTGCATCAGTTATGGTTCAGGCTTTGAATTTGATCTTACTCACATCGTCAGAATTATCTGAGCTTCGAGCTCTTTTGAAGCAATTAGTGACAAATCCTGCTGGGAAGGACTTGTATGTTTCTTTGTATGCTTCATGGTGCCATTCTCCAATGGCAATTATAAGTCTCTGCTTCTTAGCTCAGACCTACCAACATGCTAGTGCTGTGATTCAGTCTCTAGTTAAGGAGGATATTAATGTCAAATTCTTGGTCGAACTGGATAAGCTAATTCGCTTGCTGGAAACCCCAATCTTTGCCTCTCTAAGATTGCAGCTTCTTGAACCTGGAAGATATATATGGTTATTTAAGGCATTGTATGGTCTTCTGATGTTGCTTCCTCAGCAAAGTGCTGCCTTTAAGATTCTAAAAACCCGTCTTAAAGCCGTGCCACCATATTCTTTAAATGGCGAGCAATTTAGGAGAACATCCTCAGGGAATCCCTACCAAATTCTGAATCACATGACCGGTGGATCTCAAATCACTGAGGATGGGGACATAGATGTGGATGTTGGCACCTCAGATAATGGAATCAACTTTGCTGCTAGGCTACAACAGTTTGAGCAAATGCAGAACCAGCATCACATGCATGCCAGAGCTCAGGCCCAGTTGCGCAATACTTCCACTTGTGTGTCAAAGAATCATATGGAGGACGCACAGAAACTGGGAGAATCAAGGCAACGTCTGTCAGATGTTCGTGTTTCTTCTCCAAGATCATAA 2154 0.4201 MADPFSVIPAAVLRNLADKLYEKRKNAALEVEGIVKQLAANSETDKITAVINMLTTEYTGSVQANHRKGGLIGLAAATVGLSTEASRYLEQIVPPVLGAFADPDNRVRYYACEALYNIAKVVRGEFIVFFNQIFDALCKLAADSDPSVQSAAHLLDRLVKDIVTESDQFSIEEFIPLLRERMNVLSPYVRQFLVGWITVLDSVPDIDMLGFLPDFLDGLFNMLSDSSHEIRQQADSALSEFLQEIKNSPSVDYGRMAEILVQRAGSPDEFTRLTAITWINEFVKLGGDQLFPYYADILGAILPCVSDQEEKIRAVARETNEELCAIKADPAESFDVGAVLSIARRQLSSEWEATRIEALHWISTLLNRYGAEVLTFLNDIFDTLLKALSDPSDEVVLLVLEIHACIAKDPQHFRQFLVFLVHNFRVDNSLLEKRGALIIRRLCVLLDAERVYRELSTILEGESDLDFASVMVQALNLILLTSSELSELRALLKQLVTNPAGKDLYVSLYASWCHSPMAIISLCFLAQTYQHASAVIQSLVKEDINVKFLVELDKLIRLLETPIFASLRLQLLEPGRYIWLFKALYGLLMLLPQQSAAFKILKTRLKAVPPYSLNGEQFRRTSSGNPYQILNHMTGGSQITEDGDIDVDVGTSDNGINFAARLQQFEQMQNQHHMHARAQAQLRNTSTCVSKNHMEDAQKLGESRQRLSDVRVSSPRS 717
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele51g1154 717 ProSiteProfiles HEAT repeat profile. 92 127 IPR021133 -
Lele51g1154 717 SUPERFAMILY ARM repeat 10 534 IPR016024 -
Lele51g1154 717 PANTHER TAX1 BINDING PROTEIN-RELATED 7 694 IPR026825 GO:0006661|GO:0070772
Lele51g1154 717 FunFam protein VAC14 homolog isoform X1 249 410 - -
Lele51g1154 717 Gene3D - 126 253 IPR011989 -
Lele51g1154 717 MobiDBLite consensus disorder prediction 697 711 - -
Lele51g1154 717 Gene3D - 8 125 IPR011989 -
Lele51g1154 717 Gene3D - 256 479 IPR011989 -
Lele51g1154 717 FunFam ARM repeat superfamily protein 5 125 - -
Lele51g1154 717 Pfam Vacuolar protein 14 C-terminal Fig4p binding 429 608 IPR021841 -
Lele51g1154 717 Pfam Vacuolar 14 Fab1-binding region 65 161 - -
Lele51g1154 717 MobiDBLite consensus disorder prediction 697 717 - -
Lele51g1154 717 FunFam protein VAC14 homolog 126 248 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele51g1154 Lele-ChrLele51 7614122 7623090 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele51g1154 51 7614122 7623090 Lele51g1154 51 7614122 7623090 ECH
Lele49g1134 49 7509509 7520892 Lele51g1154 51 7614122 7623090 hybridization
Lele50g1705 50 21890340 21904653 Lele51g1154 51 7614122 7623090 hybridization