Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele51g1049 ATGTTAATTGGCTCTTTTTTTTTTCAGAGGGATCCAAAGGCTGAAGGAGAAATGGGGTTGACATTCACTAAGCTTTTCAGTCGGCTTTTTGCCAAGAAAGAAATGCGAATTCTGATGGTTGGTCTTGATGCTGCCGGTAAGACTACTATTTTGTACAAGCTCAAGCTTGGTGAGATTGTCACTACAATCCCTACTATTGGATTCAATGTGGAGACTGTGGAATACAAAAACATTAGCTTCACTGTTTGGGATGTTGGGGGTCAAGATAAGATTCGTCCCCTGTGGAGGCATTACTTTCAGAACACACAGGGTCTTATTTTTGTTGTAGACAGCAATGACAGAGATAGGGTTGTTGAGGCCAGAGATGAGTTACACAGGATGTTGAATGAGGATGAATTGAGAGATGCAGTATTGCTTGTATTTGCCAACAAACAAGATCTTCCTAATGCAATGAATGCTGCTGAGATCACTGATAAGCTGGGTCTCCACTCTCTCAGGCAGCGCCACTGGTACATCCAGAGCACCTGTGCTACCTCTGGGGAAGGCCTTTATGAGGGTCTGGATTGGCTCTCCAACAACATTGCCAACAAGGCTTAA 597 0.4389 MLIGSFFFQRDPKAEGEMGLTFTKLFSRLFAKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRDRVVEARDELHRMLNEDELRDAVLLVFANKQDLPNAMNAAEITDKLGLHSLRQRHWYIQSTCATSGEGLYEGLDWLSNNIANKA 198
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele51g1049 198 SMART arf_sub_2 18 198 - -
Lele51g1049 198 FunFam ADP-ribosylation factor 1 18 198 - -
Lele51g1049 198 ProSiteProfiles small GTPase Arf family profile. 28 194 - -
Lele51g1049 198 SMART rab_sub_5 35 197 - -
Lele51g1049 198 Pfam ADP-ribosylation factor family 22 194 IPR006689 GO:0003924|GO:0005525
Lele51g1049 198 SMART sar_sub_1 18 194 IPR006689 GO:0003924|GO:0005525
Lele51g1049 198 TIGRFAM small_GTP: small GTP-binding protein domain 33 174 IPR005225 GO:0005525
Lele51g1049 198 CDD Arf1_5_like 35 193 IPR045872 GO:0003924
Lele51g1049 198 PRINTS GTP-binding SAR1 protein signature 64 88 IPR006689 GO:0003924|GO:0005525
Lele51g1049 198 PRINTS GTP-binding SAR1 protein signature 91 116 IPR006689 GO:0003924|GO:0005525
Lele51g1049 198 PRINTS GTP-binding SAR1 protein signature 36 59 IPR006689 GO:0003924|GO:0005525
Lele51g1049 198 PRINTS GTP-binding SAR1 protein signature 136 157 IPR006689 GO:0003924|GO:0005525
Lele51g1049 198 Gene3D - 21 198 IPR027417 -
Lele51g1049 198 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 31 196 IPR027417 -
Lele51g1049 198 PANTHER ADP RIBOSYLATION FACTOR-RELATED 18 193 IPR024156 GO:0005525
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele51g1049 Lele-ChrLele51 6724399 6731392 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele51g1049 51 6724399 6731392 Lele51g1049 51 6724399 6731392 ECH
Lele49g1031 49 6612469 6615733 Lele51g1049 51 6724399 6731392 hybridization
Lele50g1123 50 7383819 7388836 Lele51g1049 51 6724399 6731392 hybridization