Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele51g1029 ATGGATTGTTACACGCAGTTTGGTGAGGTTGATGTTATGAGAAGACAAGGTAGAGATTTCTCAAGCATGGATTTTAGCTCGTGTTTGAGCTCTTCTTCTTGTTCAACTTCAATCATGTCTTCTCTTGTACATTTCCTTCTTCTTCTTCTTGCGTCTTTGGTTTGTTCTTGTCCTGTCGTCGTTTGTTCATCAGAAATGGTGAATCAGACGTTTCGCCCAGACCAAGAGGTCCACAAGTTGAGAACCATAAGAACTCGTCTCCAACAGATCAACAAGCCCCCTGTTAAGATAATTCAGAGTCCTGACGGCGATATCATAGACTGTGTTGTGTCTCATCATCAACCGGCTTTCGATCATCCCATGTTAAGAGGACAGAAACCACTGGATCCTCCGGAGAGACCAAAAGGGCATGATCGAAGGGGTTCTATGATGGGTGAGAATTTCCAGTTATGGAGGTTATCTGGAGAATCATGTCCAGAAGGAACGATTCCGATCAGAAGAACAAGAGAAGAAGATGTTTTAAGAGCAAGCTCTGTTCAAAGATTCGGAAGAAAATTGCCAAAACCTGTTAGAAGAGACACCAACACAAACGGACACGAGCATGCAGTGGGGTATGTGAGTGGAGATCAGTACTATGGAGCAAAAGCAAGCATAAATGTGTGGGCCCCAAGTGTGGAGAATCAATATGAATTCAGTTTGTCTCAAATTTGGGTCATCTCTGGTTCTTTTGGGGATGATCTCAACACCATTGAAGCTGGCTGGCAGGTTAGCCCAGAACTGTATGGAGATAATTACCCCAGATTTTTTACTTACTGGACGAGTGATGCATATCAAGCAACAGGGTGCTACAATTTGCTATGCTCTGGATTTGTTCAAACCAACAATAAAATAGCAATTGGGGCTGCAATCTCACCCACTTCTTCCTATAATGGTGGCCAATTTGATATTAGCTTAGTCATTTGGAAGGATCCGAAGCACGGGAACTGGTGGCTTGAATTCGGGTCAGGTATTCTAGTCGGGTACTGGCCATCATTTTTGTTCACGCATCTACAGGATCATGCAAGCATGGTTCAATTTGGAGGGGAAGTAGTGAATTCGGATCCTTCCGGGTCTCACACTTCGACCCAGATGGGAAGCGGGCATTTTGCGGGTGAAGGGTTCGGAAAAGCCTCCTATTTTCGGAACCTACAAGTGGTGGATTGGGACAACAGCTTGATTCCGTTGACAAATCTTCGGGTCTTGGCGGATCACCCGAATTGTTATGATATCCAAGGAGGGATTAATAATGTGTGGGGGAACTACTTTTACTACGGTGGACCAGGGAAAAATGATAGGTGTCCTTAA 1344 0.4449 MDCYTQFGEVDVMRRQGRDFSSMDFSSCLSSSSCSTSIMSSLVHFLLLLLASLVCSCPVVVCSSEMVNQTFRPDQEVHKLRTIRTRLQQINKPPVKIIQSPDGDIIDCVVSHHQPAFDHPMLRGQKPLDPPERPKGHDRRGSMMGENFQLWRLSGESCPEGTIPIRRTREEDVLRASSVQRFGRKLPKPVRRDTNTNGHEHAVGYVSGDQYYGAKASINVWAPSVENQYEFSLSQIWVISGSFGDDLNTIEAGWQVSPELYGDNYPRFFTYWTSDAYQATGCYNLLCSGFVQTNNKIAIGAAISPTSSYNGGQFDISLVIWKDPKHGNWWLEFGSGILVGYWPSFLFTHLQDHASMVQFGGEVVNSDPSGSHTSTQMGSGHFAGEGFGKASYFRNLQVVDWDNSLIPLTNLRVLADHPNCYDIQGGINNVWGNYFYYGGPGKNDRCP 447
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele51g1029 447 FunFam Putative carboxyl-terminal proteinase 220 339 - -
Lele51g1029 447 Pfam Neprosin activation peptide 98 205 IPR025521 -
Lele51g1029 447 Pfam Neprosin 229 440 IPR004314 -
Lele51g1029 447 Gene3D - 222 337 - -
Lele51g1029 447 PANTHER PROTEIN, PUTATIVE (DUF239)-RELATED-RELATED 83 443 - -
Lele51g1029 447 MobiDBLite consensus disorder prediction 125 142 - -
Lele51g1029 447 MobiDBLite consensus disorder prediction 119 142 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele51g1029 Lele-ChrLele51 6524837 6529354 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele51g1029 51 6524837 6529354 Lele51g1029 51 6524837 6529354 ECH
Lele49g1008 49 6403446 6407894 Lele51g1029 51 6524837 6529354 hybridization
Lele50g1101 50 7158939 7163558 Lele51g1029 51 6524837 6529354 hybridization