Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele51g0932 ATGGCACTGAGCAACCATGCTATCGGAGCCATCAACTTCGTCGCTGTACTGCTGGCGATTCCAATAATCGGCGCCGGAATCTGGCTAATGAACGAGCCTGCAAATACCTGCGTGAAGACTCTACAATGGCCGGTCATAATACTTGGGGTTCTCATACTGGTGGTGGCTCTAGCTGGCCTCATCGGAGGGTTCTGGAGAATCCAATGGCTACTCATTCTCTACATGGTCGCCATGATCGTCCTCATCATACTTCTGGTTTGCTTGGCGGTGTTCATCTACATGGTCACCCTCAGAGGCCACGGCGACATTGAACCCAACCGAGCTTACTTGGAATACCACCTCGACAACTTCTCCGGCTTTCTCCGCCGCCGTGTCAGGAGTTCCTATAAATGGGACGGCATCAGAAGCTGCCTCAGCTCCTCAAATATGTGTAATGAGCTGAACCAGAGTTACCGCATGGCTCAGGACTTCTTCAACGCACATCTAACACCCATGCAGGTACCTACATGA 510 0.5176 MALSNHAIGAINFVAVLLAIPIIGAGIWLMNEPANTCVKTLQWPVIILGVLILVVALAGLIGGFWRIQWLLILYMVAMIVLIILLVCLAVFIYMVTLRGHGDIEPNRAYLEYHLDNFSGFLRRRVRSSYKWDGIRSCLSSSNMCNELNQSYRMAQDFFNAHLTPMQVPT 169
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele51g0932 169 Pfam Tetraspanin family 7 139 IPR018499 GO:0016020
Lele51g0932 169 PRINTS Transmembrane four family signature 6 29 - -
Lele51g0932 169 PRINTS Transmembrane four family signature 65 93 - -
Lele51g0932 169 PRINTS Transmembrane four family signature 38 64 - -
Lele51g0932 169 PANTHER TETRASPANIN-8-RELATED 1 166 IPR044991 GO:0009734|GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele51g0932 Lele-ChrLele51 5813795 5814304 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele51g0932 1 166 Miscellaneous Gene Families AT5G46700 68.072 3.47e-73 219
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele51g0932 51 5813795 5814304 Lele51g0932 51 5813795 5814304 ECH
Lele49g0916 49 5720883 5721807 Lele51g0932 51 5813795 5814304 hybridization
Lele50g0971 50 6149653 6151004 Lele51g0932 51 5813795 5814304 hybridization