Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele51g0895 ATGTACTTTGATCTGGATTGGGAAACCCAATTATCAGCTCATGATTATAATCCAAAATTTGACAAGACCTGTTGCCAATTCTTTAAGAATAGCGCTGGTGCCCCTGGTTCAAAGTTACGTGTTCCTCCCGTGGTATCTGAGCCACTTGGCTTTGGTCAACGTCATGATGCTACGGTGGATATTCCATCAGAGAATACAAATGTCTCTAAGAAAAGGGTACAAGAGCTTGCAACTTGGGAAGCAGATCTGAAAAGGAGAGAGCAGGAAATCAAAAGAAGAGAAGATGCAGTTGCCAGATGGATTGTTCTCTGTCTGGCTTTTAATGTAGTTGCCGTGATGGTCTGTTGGATTAGAGGCGGTGGTAAGCTTATATCTACATTGATGCTTTTATATTTGGATGCTGCCAGGCCCCTTTACCGTGCTATGAGGACAGATAGTGCATTTAAGTTCGGTTGGTTTTTCCTGTTTTACATGCTGCATATTGCTTTTTGTGTCATTGCTGCGATTGCACCTCCGATTGTCTTTCATGGAAAGTCATTAACGAATGCAGATATATCAAAATCATCATTTTGTTCAGGGACTGCTGCAGTTCTAAAATGTGTTATTTTGTTGAAAAGACGCTACTCACCTGTACTTGCTGTTATAAGAATCTATGTTCTGTTTCTTGCTGTTAACTTAAGGCCATTCTTTTACTTGGGCATTCTTGCAGCAATTGATGTCTTCTCAGACCATGTGTTAGTTGGGAATAATTTGGATGCCCTTAAAAGTGATAAGATATTGATGAAATGCGTACTAGTTGAAGTTGCTGGGGGAAAAAAATCAAATTGCATTTGTTAG 837 0.4002 MYFDLDWETQLSAHDYNPKFDKTCCQFFKNSAGAPGSKLRVPPVVSEPLGFGQRHDATVDIPSENTNVSKKRVQELATWEADLKRREQEIKRREDAVARWIVLCLAFNVVAVMVCWIRGGGKLISTLMLLYLDAARPLYRAMRTDSAFKFGWFFLFYMLHIAFCVIAAIAPPIVFHGKSLTNADISKSSFCSGTAAVLKCVILLKRRYSPVLAVIRIYVLFLAVNLRPFFYLGILAAIDVFSDHVLVGNNLDALKSDKILMKCVLVEVAGGKKSNCIC 278
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele51g0895 278 Coils Coil 76 96 - -
Lele51g0895 278 Pfam SCAMP family 88 177 IPR007273 GO:0015031|GO:0016020
Lele51g0895 278 PANTHER SECRETORY CARRIER-ASSOCIATED MEMBRANE PROTEIN SCAMP 100 248 IPR007273 GO:0015031|GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele51g0895 Lele-ChrLele51 5498046 5501743 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele51g0895 14 193 Miscellaneous Gene Families AT1G32050 42.128 9.40e-51 166
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele51g0895 51 5498046 5501743 Lele51g0895 51 5498046 5501743 ECH
Lele49g0878 49 5419106 5430700 Lele51g0895 51 5498046 5501743 hybridization
Lele50g0916 50 5767341 5771597 Lele51g0895 51 5498046 5501743 hybridization