Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele51g0862 ATGTGTCCACCCTTTGAATTCTCTGCAAAATATTATCATGTTTCTGAAAATGGAGGTGGCTGTGTGAGGCAGAGCAGTTTCTTTGAAGGCAAACCTGTGCTTAATCAGGGAGTTGGATACTCTGTTATTCTTGGTTTTGGTGCTTTCTTCGCTATCTTCACCTCTTTATTGGTCAGTAACCCTTACAAACAAGTTTCGTTTCTTTCTGTAATTTCCTTTGGACAGGGGCTGCAACAATACTGCAAAGTTCAAACGTTGCTTGGGAGTATGGAATTAGTGGACCTTTTTGTCATGGCCATAGAGATTAAAAGAAAGGCTCCTTATGCTCATACTGTTTGTGAAATTGTCAAAGCTAGATGGGGAACAGCTGCACACGTTGTATTCCTTATCTTCTGCTTCTTGACAAACATAATTGTAACAGCCATGTTGCTTCTTGGTGGTTCAGTTGTAAATGCGTTGACTGGAGTCAACATTTATGCTGCTAGCTTCCTAATACCACTTGGAGTTATCGTCTATACTCTTGCTGGAGGCCTCAAAGCCACTTTCTTGGCAAGCTATATACATTCTGTCATAGGTTGTAGTTCACTTCAATTTCAGTCATTTAAAACATTCTTTTTTAATGGGAATTACAAAGGATCTTACCTGACAATGCTGAGTTCAGGTGGCTTGGTTTTTGGGATTATTAATATTGTTGGCAACTTTGGCATTATCTCTGTGGATAATGGATATTGGGTGAGTGCCGTTGCTGCAAGACCTTCATCAACTCACAAGGGCTATTTGTTGGGAGAATTGGTCTGGTTTGCCGAGCCATTTTCTTTGGCTACTTCATTAGGTCTTGGAGCTCTAGCCCTTGATTTGCCGATAAATGAAATCGAGGCTGGTTATGGACTTGTCCCCCCTGCTACTGCAGTGGCTTTAATGGGAAAAGGAGGATCCATTCTTCTTCTCACAATACTTTTTAAGGCAGTGACTTCAGCTGGTTCATCAGAACTTATTGCAGTGTCCTCTTTATGCACATATGATATCTACCGTACTTACATAAATCCAAATGCAAGTGGAAAGAAAATCCTGAGAGTGTCAAGAGGGATAGTCCTAGGATTTGGGTGTTTCATGGGATTGTTAGCAGTTATACTAAACAAAGCAGGTGTTTCTCTGGGTTGGATGTACCTTGCAATGGGAGGTCTGATTGGTTCAGCAGTTCTTCCCATTGCATTCATGATTCTATGGACAAGAGCAAATGCAAGTGGGGCCATCCTTGGAACAATTATGGGCTGTATCCTAGGAATCATCTCATGGTTGTCTGTCACCAAGATCGTGTATGGCTCGATAAACCTCGATACAACCGGTAGAAATGCCCCGATGCTAGCAGGAAACCTTGTCTCGATCCTAACTGGAGGAGCAATTCATGCTATCAGCAGCATGTTATGGCCTCAGAACTATGACTGGACTACCACCAGACAAATTACAACGGTTGAAAAGGAAAAATCTGATCTTCCAAAAGAAGAATTCACAGAAGAGAAGCTGTTAAAAGCCAAAGCATGGATAGTGAAGTGGGGTATTGGCTTCACTGTTTTGATAGCTATCATATGGCTTATTCTATCCCTCCCAGCTGGGCAATTTAGTGAAGGGTACTTCTATTTCTGGGCTTTGATTGCAATAGGGTGGGGAACTATTGGTTCTGCAGTGATAATAGCATTACCAATAATAGAGAGTTGGGAAACAATCCACAGTGTGATTACTGGAATGTTTACAAATGACATACTCATTGAGAAGGTTGAAGAGTTGAATTTCAAGTTGCAGACAATCATACAGGCAATTCCAGAAGCAGAGAGACTTTATTTGCTTGAGAAGGAGAAGGCAAAGAAAGCAGAATCCTCAGAGCAACAACAACCTTCTCTTCCTGCTTGA 1908 0.4156 MCPPFEFSAKYYHVSENGGGCVRQSSFFEGKPVLNQGVGYSVILGFGAFFAIFTSLLVSNPYKQVSFLSVISFGQGLQQYCKVQTLLGSMELVDLFVMAIEIKRKAPYAHTVCEIVKARWGTAAHVVFLIFCFLTNIIVTAMLLLGGSVVNALTGVNIYAASFLIPLGVIVYTLAGGLKATFLASYIHSVIGCSSLQFQSFKTFFFNGNYKGSYLTMLSSGGLVFGIINIVGNFGIISVDNGYWVSAVAARPSSTHKGYLLGELVWFAEPFSLATSLGLGALALDLPINEIEAGYGLVPPATAVALMGKGGSILLLTILFKAVTSAGSSELIAVSSLCTYDIYRTYINPNASGKKILRVSRGIVLGFGCFMGLLAVILNKAGVSLGWMYLAMGGLIGSAVLPIAFMILWTRANASGAILGTIMGCILGIISWLSVTKIVYGSINLDTTGRNAPMLAGNLVSILTGGAIHAISSMLWPQNYDWTTTRQITTVEKEKSDLPKEEFTEEKLLKAKAWIVKWGIGFTVLIAIIWLILSLPAGQFSEGYFYFWALIAIGWGTIGSAVIIALPIIESWETIHSVITGMFTNDILIEKVEELNFKLQTIIQAIPEAERLYLLEKEKAKKAESSEQQQPSLPA 635
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele51g0862 635 Gene3D Sodium/glucose cotransporter 89 532 IPR038377 -
Lele51g0862 635 ProSiteProfiles Sodium:solute symporter family profile. 92 438 IPR001734 GO:0016020|GO:0022857|GO:0055085
Lele51g0862 635 Pfam Sodium:solute symporter family 297 424 IPR001734 GO:0016020|GO:0022857|GO:0055085
Lele51g0862 635 PANTHER - 97 621 IPR031155 GO:0015204|GO:0016020|GO:0071918
Lele51g0862 635 CDD SLC5sbd_DUR3 97 476 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele51g0862 Lele-ChrLele51 5295947 5299555 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele51g0862 2 624 Organic Solute Cotransporters AT5G45380 62.340 0.0 813
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele51g0862 51 5295947 5299555 Lele51g0862 51 5295947 5299555 ECH
Lele49g0846 49 5232279 5234421 Lele51g0862 51 5295947 5299555 hybridization
Lele50g0880 50 5546185 5549947 Lele51g0862 51 5295947 5299555 hybridization