Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele49g0846 ATGCCGGGACCCTATGTCACACCATGGCCAATCATGTGGTCCAGGATAGTTGCTGCAAGACCTTCATCAACTCACAAGGGCTATTTGTTGGGAGGATTGGCCTGGTTTGCCGTGCCATTTTCTTTGGCTACTTCATTAGGTCTTGGAGCTCTAGCCCTTGATTTGCCTATAAATGAAAGCAGCTGGGCCGTGACTTCAGCTGGTTCATCAGAACTAATTGCAGTGTCCTCTTTATGCACATATGATATCTACCGTACTTACATAAATCCAAATGCAAGTGGAAAGAAAATCCTGAGAGTGTCAAGAGGGATAGTCCTAGGATTTTGGTGTTTCATGGGATTGTTAGCAGTTATACTAAACAAAGCAGGTGTTTCTCTTGGTTGGATGTACCTTGCAATGGGAGTTCTGATTGGTTCAGCAGTTCTTCCCATTGCATTCATGCTTCTATGGACAAGAGCAAATGCAAGTGGGGCCATCCTTGGAACAATTATGGGCTGTATCCTAGGAATCATATCATGGTTGTCTGTCACCAAGATTGAATATGGCTCTATAAACCTCGATACACCCGGTAGAAATGCACCGATGCTAGCAGGAAACCTTGTCTCGATCCTAACTGGAGGAGCAATTCATGCTATCAGCAGCATGTTATGGCCTCAGAACTATGACTGGACTACCACTAGACAAATTACAACGGTTGAAAAGGAAAAATCTGATCTTCCAAAACAAGAATTCAGAGAAGAGAAGCTGTTAAAAGCCAAAGCATGGATAGTGAAGTGGGGCATTGGCTTCACTGTTTTGATAGCTATCATATGGCCTATTCTATCCCTCCCAGAAGGGCAATTTACTGAAGGGTACTTCTATTTCTGGGCTTTGATTGCAATAGGGTGGGGAACTATTGGTTCTGCAGTGATAATAGCATTAACAATAATAGAGAGTTGCCACAGTGTGATTATTGGAATGTTTACAAATGACATACTCATTGAGAAGGTTGAAGAGTTGAATTTCAAGTTGCAGACAATCATACAGGCAATTCCAGAAGCAGGGAGACTTTATTTGCTTGAGAAGGAGAAAGCAACAACAACCTTCTCTCCCTGCTTGAGAGATTCTCTGGGACAAAAAAGAACTGTGAAAATGTATTTGCTGCATTATTTTCATATCAATACAAACATGATATAG 1176 0.4192 MPGPYVTPWPIMWSRIVAARPSSTHKGYLLGGLAWFAVPFSLATSLGLGALALDLPINESSWAVTSAGSSELIAVSSLCTYDIYRTYINPNASGKKILRVSRGIVLGFWCFMGLLAVILNKAGVSLGWMYLAMGVLIGSAVLPIAFMLLWTRANASGAILGTIMGCILGIISWLSVTKIEYGSINLDTPGRNAPMLAGNLVSILTGGAIHAISSMLWPQNYDWTTTRQITTVEKEKSDLPKQEFREEKLLKAKAWIVKWGIGFTVLIAIIWPILSLPEGQFTEGYFYFWALIAIGWGTIGSAVIIALTIIESCHSVIIGMFTNDILIEKVEELNFKLQTIIQAIPEAGRLYLLEKEKATTTFSPCLRDSLGQKRTVKMYLLHYFHINTNMI 391
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele49g0846 391 Pfam Sodium:solute symporter family 64 165 IPR001734 GO:0016020|GO:0022857|GO:0055085
Lele49g0846 391 ProSiteProfiles Sodium:solute symporter family profile. 63 179 IPR001734 GO:0016020|GO:0022857|GO:0055085
Lele49g0846 391 PANTHER - 13 54 IPR031155 GO:0015204|GO:0016020|GO:0071918
Lele49g0846 391 Gene3D Sodium/glucose cotransporter 3 275 IPR038377 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele49g0846 Lele-ChrLele49 5232279 5234421 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele49g0846 13 357 Organic Solute Cotransporters AT5G45380 62.467 8.95e-156 454
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele49g0846 49 5232279 5234421 Lele49g0846 49 5232279 5234421 ECH
Lele49g0846 49 5232279 5234421 Lele51g0862 51 5295947 5299555 hybridization
Lele49g0846 49 5232279 5234421 Lele52g0862 52 5584229 5588024 hybridization