Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele51g0861 ATGATGAACAGCGGTGTTATTATTACCCGCAGAGTCGCTGTCTCCGCCGGCTCACGTTTCTTCTCTACTACTACTGGTTCAACCGCTCGTGCTGTCGCCAGTGAGGCGGTGTTGAGTAATGTCGCCAAGGGTTTTGGCGATCAGGTTGCGATTCGTGGTTACTGGCTTAGGGTTCCATTGATTCACGGTGGAAGTGTGCGGTATTCGAGCACTTTGTCTGTGGAAGAGAAAGAGAAGCAGGATGTGCCGGCTACTGCTTCAACCGATAGCAGTGCGAGTGGGAACAAAGACGCGAAGGTGATGGAGAGTTATTGGGGCGTTGCTCCCTCGAGGATCACGAAGCCGGACGGTACGGAATGGAAGTGGAATTGTTTTATGCCATGGGAGACGTACAAAGCAGATTTATCGATTGATCTGAAGAAGCACCATGCACCGGAGACATTTATGGACAAGATGGCTTATTGGACCGTCAAGACTCTCAGATGGCCCACTGATATATTCTTCCAGAGACGGTACGGATGCCGAGCAATGATGCTGGAGACAGTGGCGGCTGTACCGGGCATGGTAGGAGGGATGCTGCTGCACTTAAAGTCGCTCAGACAGTTTGAGCACAGTGGGGGTTGGATCAAGGCACTGATGGAAGAAGCAGAGAACGAGCGCATGCACTTAATGACGTTCATGGAGGTTTCAAAGCCGAGGTGGTACGATCAAGCACTGGTCATAGCCGTCCAAGGTGTCTTCTTCAATGCTTACTTCTTGGGGTATTTGCTGTCCCCTAAATTCGCACACCGCATGGTTGGGTACCTTGAGGAGGAGGCTATTCACTCCTACACTGAGTTCCTCAAGGAGTTGGACAAAGGCACCATCGAGAATGTTCCAGCACCTGCCATTGCCATCGACTATTGGCAGCTTCCGGCTGACGCCACTTTGAGAGACGTCGTCATGGTGGTTAGAGCTGATGAAGCCCACCACCGTGACGTCAACCACTTTGCATCGGACATACATTATCAAGGGCGAGAGCTTAGGGAAGCTCCAGCTCCTATTGGTTATCACTAG 1056 0.5161 MMNSGVIITRRVAVSAGSRFFSTTTGSTARAVASEAVLSNVAKGFGDQVAIRGYWLRVPLIHGGSVRYSSTLSVEEKEKQDVPATASTDSSASGNKDAKVMESYWGVAPSRITKPDGTEWKWNCFMPWETYKADLSIDLKKHHAPETFMDKMAYWTVKTLRWPTDIFFQRRYGCRAMMLETVAAVPGMVGGMLLHLKSLRQFEHSGGWIKALMEEAENERMHLMTFMEVSKPRWYDQALVIAVQGVFFNAYFLGYLLSPKFAHRMVGYLEEEAIHSYTEFLKELDKGTIENVPAPAIAIDYWQLPADATLRDVVMVVRADEAHHRDVNHFASDIHYQGRELREAPAPIGYH 351
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele51g0861 351 PIRSF AO 16 54 IPR002680 GO:0009916
Lele51g0861 351 PIRSF AO 57 347 IPR002680 GO:0009916
Lele51g0861 351 Gene3D Alternative oxidase 107 348 IPR038659 -
Lele51g0861 351 Pfam Alternative oxidase 141 331 IPR002680 GO:0009916
Lele51g0861 351 CDD AOX 168 335 IPR002680 GO:0009916
Lele51g0861 351 FunFam Ubiquinol oxidase 104 348 - -
Lele51g0861 351 PANTHER ALTERNATIVE OXIDASE 10 351 IPR002680 GO:0009916
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele51g0861 Lele-ChrLele51 5289787 5291790 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele51g0861 1 351 Miscellaneous Gene Families AT3G22370 69.444 0.0 518
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele51g0861 51 5289787 5291790 Lele51g0861 51 5289787 5291790 ECH
Lele49g0843 49 5224598 5224897 Lele51g0861 51 5289787 5291790 hybridization
Lele50g0879 50 5538747 5541453 Lele51g0861 51 5289787 5291790 hybridization