Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele51g0858 ATGCCTCAAGAGCAGCCGGGGTCCTTTCGAAGGAGCCTGTCAAGAAGGCGCTCCTTAAGGTCTGGGACAGATACGGATGATAGGGGGTGGACCTCACTTCATGTTTACGCTCGCAAAGGGGATCTCAAATTGGTTAAAAAGCTTATTGACGAAGGAATGGATGTAAATGTTATTGCATGGGGTCCAAAATCTAAAGGTGTGACCCCGCTTCATCTTGCTGCTGAAGGTGGCCACCTTGAAGTCATGGATGAATTACTTGAGCGTGGTGCTAACATTGATGCCAGGACTAAGGGTGCTTGTGGCTGGACACCTCTCCACATTGCGGCTAAAGAAAGGGGGAGGGCTGCGGTGAAATTCCTGATAGAGAATGGAGCATTTTTGCCTCCTGATATCAACGATTGCAGATTTAATCCCCCAGTTCATTACTGCCCAGGACTTGAGTGGGCCTATGAGGAAATGAAGCTTCATTATGAAAACTCATCATCATCTGGGGAGACCTCTAGCAGGATTGTCACTGTGTGTTGGATGCTATATCCCTGCATGGGAACAATGGGATGTCCTGCTTTGGAATTTATTCTGTTGAACTCTTCATTATCTACAACAATCCGCGGAGACATTATTATGAAGGATGATGCGTCTGGTTTTAATGAAACGCTTCTATTGGATGAGACTTGGTATTGTGATGATAACCCAAAAACCAATCGTCCATGCTTTGGTTCGGAGTATGTTCACTCCCCAAGGTTTGAAATGGCTAGATAG 759 0.4598 MPQEQPGSFRRSLSRRRSLRSGTDTDDRGWTSLHVYARKGDLKLVKKLIDEGMDVNVIAWGPKSKGVTPLHLAAEGGHLEVMDELLERGANIDARTKGACGWTPLHIAAKERGRAAVKFLIENGAFLPPDINDCRFNPPVHYCPGLEWAYEEMKLHYENSSSSGETSSRIVTVCWMLYPCMGTMGCPALEFILLNSSLSTTIRGDIIMKDDASGFNETLLLDETWYCDDNPKTNRPCFGSEYVHSPRFEMAR 252
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele51g0858 252 ProSiteProfiles Ankyrin repeat profile. 28 60 IPR002110 GO:0005515
Lele51g0858 252 SUPERFAMILY Ankyrin repeat 25 143 IPR036770 -
Lele51g0858 252 ProSiteProfiles Ankyrin repeat profile. 65 97 IPR002110 GO:0005515
Lele51g0858 252 ProSiteProfiles Ankyrin repeat region circular profile. 100 125 - -
Lele51g0858 252 SMART ANK_2a 28 57 IPR002110 GO:0005515
Lele51g0858 252 SMART ANK_2a 100 133 IPR002110 GO:0005515
Lele51g0858 252 SMART ANK_2a 65 94 IPR002110 GO:0005515
Lele51g0858 252 Gene3D - 17 165 IPR036770 -
Lele51g0858 252 ProSiteProfiles Ankyrin repeat region circular profile. 65 97 - -
Lele51g0858 252 Pfam Ankyrin repeats (3 copies) 33 125 IPR002110 GO:0005515
Lele51g0858 252 PANTHER ANKYRIN REPEAT, PH AND SEC7 DOMAIN CONTAINING PROTEIN SECG-RELATED 25 148 - -
Lele51g0858 252 PRINTS Ankyrin repeat signature 66 81 IPR002110 GO:0005515
Lele51g0858 252 PRINTS Ankyrin repeat signature 116 130 IPR002110 GO:0005515
Lele51g0858 252 ProSiteProfiles Ankyrin repeat region circular profile. 28 57 - -
Lele51g0858 252 ProSiteProfiles Ankyrin repeat profile. 100 125 IPR002110 GO:0005515
Lele51g0858 252 MobiDBLite consensus disorder prediction 1 26 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele51g0858 Lele-ChrLele51 5267819 5270338 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele51g0858 25 143 Miscellaneous Gene Families AT2G31820 33.333 8.23e-08 50.8
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele51g0858 51 5267819 5270338 Lele51g0858 51 5267819 5270338 ECH
Lele49g0840 49 5207028 5208527 Lele51g0858 51 5267819 5270338 hybridization
Lele50g0875 50 5518084 5519653 Lele51g0858 51 5267819 5270338 hybridization