Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele51g0855 ATGGATGCTATAAGAAAGCAAGCTAGCAAATTAAGGGAGCAAGTTGCCAAGCAGCAGCAGGCTATACTTAGACAATTAGGCCAAATTAGCAATGAACCGCTAATAACGGATGAATCAGAAGTTCAATGTCACCAACAATTGCGAAAATTATACAATTCTACAAAAGCAGCCAAGAATTTTCAGCGGCATATTGTCCGTGGTATTGAAGGTTTAACCTCTGTTAGTTTAAAGCAGATGGATATAGTGAGGAAGTTGTCTAAAGACTGTTGTAAGTATGGGACTGAGAATGAAAACAGTAAATATCCTCTTGCAAAGGCTTCTCTTCACATGGGTAACTCATATGATTTAATGGAAAATGAAAGGGAGACTTTGCTTGCAATCTACAGTCATCAGGTCTCTGAGCCATTACGGGCACAAATTACAGGAGCTCCTTTGGAGGATGCACGCCACCTCACTTATCGTTATGACAAACTTTTTCAAGAGGTAGAAGCTCAGGCTGCTGAAGTTTTGAGGCGTCGATCAAAGTGGAGGGATTCTTCTGTTTCTGCAGAGAACTCCATGAAGGTTCAAAATGCTGAGGCTAGGTTGAAAGAACTTAAATCAGCCTTGGTAGCGCTTGGTAGAGAAGCAACTGCTGCCATGGTGTCAGTTGAAGATGAACAACAACAGATAACTCTCAAGAGCCTTCGGGCAATGGTGGATGACGAGAGAGCTTATCATGAGCATGCCCTTGTTATTTTAGAGAAGCTATATTCTGAGATGATTCTGGAGAAGCAATCAAAAGAGTCTCCTTCCATTCCAGTTCCAAGAGATGGATATAATCAACTTGTGTCTGAGAATGCTAATGTGGTCCACCCATTTGATGCTCAAGCTGAGGGGGAGTTAAGTTTATCAGTCGACGATTATGTCGTAGTTCGGCAGGTATCTCCACATGGATGGTCTGAAGGAATATGCAAAGGCAATGCTGGATGGTTTCCGTCTGCATATGTAGAGAGAGAGGAGAAAATACCAGCGAGCCTGATAATGGAAACAACATCAACACCTTGA 1047 0.4231 MDAIRKQASKLREQVAKQQQAILRQLGQISNEPLITDESEVQCHQQLRKLYNSTKAAKNFQRHIVRGIEGLTSVSLKQMDIVRKLSKDCCKYGTENENSKYPLAKASLHMGNSYDLMENERETLLAIYSHQVSEPLRAQITGAPLEDARHLTYRYDKLFQEVEAQAAEVLRRRSKWRDSSVSAENSMKVQNAEARLKELKSALVALGREATAAMVSVEDEQQQITLKSLRAMVDDERAYHEHALVILEKLYSEMILEKQSKESPSIPVPRDGYNQLVSENANVVHPFDAQAEGELSLSVDDYVVVRQVSPHGWSEGICKGNAGWFPSAYVEREEKIPASLIMETTSTP 348
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele51g0855 348 Gene3D SH3 Domains 277 333 - -
Lele51g0855 348 Coils Coil 182 209 - -
Lele51g0855 348 PANTHER SH3 DOMAIN-CONTAINING 18 332 - -
Lele51g0855 348 SUPERFAMILY BAR/IMD domain-like 42 254 IPR027267 -
Lele51g0855 348 Coils Coil 1 21 - -
Lele51g0855 348 SUPERFAMILY SH3-domain 278 339 IPR036028 GO:0005515
Lele51g0855 348 Gene3D Arfaptin homology (AH) domain/BAR domain 6 257 IPR027267 -
Lele51g0855 348 Pfam Variant SH3 domain 283 331 IPR001452 GO:0005515
Lele51g0855 348 SMART SH3_2 279 334 IPR001452 GO:0005515
Lele51g0855 348 ProSiteProfiles Src homology 3 (SH3) domain profile. 276 335 IPR001452 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele51g0855 Lele-ChrLele51 5244195 5249479 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele51g0855 51 5244195 5249479 Lele51g0855 51 5244195 5249479 ECH
Lele49g0837 49 5182997 5187218 Lele51g0855 51 5244195 5249479 hybridization
Lele50g0871 50 5488538 5492723 Lele51g0855 51 5244195 5249479 hybridization