Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele51g0839 ATGGGCTCCCAGGGTGGGTTCGGGCAATCCAAGGAGTTCCTTGATCTGGTAAAGTCCATTGGTGAAGCTCGATCCAAGGCCGAGGAAGACCGAATCGTCCTCAATGAGATCGAAACCCTCAAGCGGCGTATAATTGAACCTGACATTCCCAAGCGCAAGATGAAGGAATACATCATTCGCCTTGTTTATGTGGAGATGTTGGGTCACGATGCCTCTTTTGGTTACATTCATGCCGTTAAGATGACCCACGACGACAATATCCTCCTTAAACGAACTGGGTATTTGGCTGTGACCCTTTTTCTGAATGAAGATCACGATTTGATCATCCTCATTGTCAATACCATTCAGAAGGACCTCAAGTCTGACAATTATTTAGTTGTCTGTGCTGCCCTTAATGCCGTCTGTAGGCTGATTAATGAAGAGACTATTCCGGCTGTACTGCCTCAAGTGATTGAGCTTTTGGGTCATTCCAAGGAGGCCGTTCGGAAGAAGGCTATCATGGCTCTTCATCGCTTCTATCAGAAGTCACCTTCTTCAGTGTCACACTTGATCTCCAATTTCCGCAAGAGATTGTGTGATAATGATCCTGGTGTAATGGGTGCCACGTTATGCCCTCTATTTGACCTCATCATGAATGATGTCAATTCTTTCAAAGATCTCGTCATCAGCTTTGTGAGCATTCTCAAACAAGTAGCAGAACGCAGATTGCCAAAGAGCTATGACTATCATCAGATACCTGCTCCATTCATTCAGATTAAATTGCTGAAAATCTTGGCCTTGTTAGGGAGTGGTGACAAGCAAGCCAGTGAAAACATGTATACTGTTGTTAGTGATATAATCAGGAAGGGCGATTCATCAAGTAATATAGGGAACGCTATTCTATATGAGTGCATATGCTGTGCAGCTTCTATATATCCCAATCCTAAGCTAATAGAAGCTGCTGCCGATGTTGTTGCAAAATTTTTAAAGAGTGACACTCATAATCTTAAGTACATGGGTATTGATGCCCTTGGTCGGCTAATAAAGTTAAGCCCGCAAATTGCAGAACAACACCAACTGGCCGTGATTGACTGCTTAGAGGACCCTGATGATACTTTGAAGCGGAAAACGTTCGAATTGCTATACAAGATGACCAAGTCCTCTAATGTGGAAGTGATTGTTGACCGTATGATTGAATACATGATTAGTATTAGTGATGATCATTATAAAACCTATATAGCATCTCGTTGTGTGGAACTTGCTGAGCAATTTGCACCTAGTAATCATTGGTTTATACAGACTATGAATAAAGTTTTTGAGCATGCTGGAGATCTTGTGAATGTCAAGGTAGCACATAATTTGATGCGGTTGATTGCAGAAGGATTTGGAGAGGATGATGATGCTGCAGATAGTCAGTTGAGATCATCAGCTGTGGAGTCATATTTGCGTATTGTTGGAGAGCCAAAGCTGCCATCTGTGTTTCTTCAAGTCATTTGTTGGGTTCTTGGGGAATATGGCACAGCAGACGGAAAGCATAGTGCATCCTATATCACTGGGAAGTTGTGTGATGTGGCAGAGGCATATTCTAACGATGTAACTGTTAAGGCATATGCAACTTCAGCACTAATGAAAATTTATGCATTTGAAGTAGCTGCTGGAAGGAAAGTGGATTTGCTACCTGAGTGTCAAACGTTGATTGAAGAAATGTTAGCATCCCACTCTACAGATTTGCAGCAGCGAGCCTATGAATTGCAAGCTCTTATTGGGTTGGACAGACAAGTTGTTGAGGCTATAATGCCACAAGACGCAAGTTGTGAAGATATTGAGGTTGATAGGAACCTTTCATTCCTCAACGATTACGTCCAACAGTCCATAGAAAGGGGTGCTCAGCCTTACATTCCTGAGGATGTGCGCGCTGGAATGGATGATATGAGCAACTTCAGAGGCCAAGATAAGCATGAACCTTCACATCATGTACTGAGATTTGAGGCATATGAACTTCCAAAGGCTCCAACGGTTTCAATTGCATCCTCAACAGACCTTGTTCCAGTACCTGAGGCACTGTATTCTAGGGAGTCCCACCAGATCTCATCAGCAGCATCAGCATCAGAAGCAGGATCATCAGGACTTAAGCTTCGGCTTGATGGTGTTCAAAGGAAGTGGGGCAGGCCAACATATTCAACTCCAGCACCATCTAATACTTTAGAATCTTCTTCCCAAAAACCAGTGAATGGGATGACCCAGGGGAATGGTGCAAGTGCAGTAAATTCAAAAGTACGGGATAGTTATGATTCAAGGAAGACACCAGTTGAAATTTCTCCAGAAAAGCAGAAACTTGCTGGTTTATTGTTTGGTGGTTCTAGTAAGCCTGAGAGAAAATCATCAGCCGGCCATAAGGCTCCAAAGGCAAATGCCAGTGCAGCAGACAGATCTCAGGAATCAAAGATTGCAGTTGCCTCCGATGAAGCAGCTGGAGAGAAAACAAATCATCAACCTGCTCCAGATTTGCTGGACTTGGGGGAACCAACTGTCACAACTGCTCCTCCTTCTGTGGTGGACCCATTCAAGCAGCTGGAAGGACTTCTTGACGCAAGCCCTGGTTCGACAATAGATCATAGTGCAGGTGCTACTGCAAAAGTTCCTGATATTATGACGCTTTATGGAGGGACAACCACTGGCGAGCAGAGCGCAAGTGGTGGCTATTCTATCCCTGTTAGTGGAGAGGGAAATCTTTTATCTGGCTTGTCAAATGCACCTGCGACTGTGACATCATCTCCTCAATCTGTGAAGGGTCCAAATGCTAAAGAATCATTGGAGAAGGATGCGCTAGTGAGGCAGTCGGGTGTGAACCCATCAAGTCAAAATCCAAACTTGTTCAAAGACTTGCTTGGCTAA 2874 0.4398 MGSQGGFGQSKEFLDLVKSIGEARSKAEEDRIVLNEIETLKRRIIEPDIPKRKMKEYIIRLVYVEMLGHDASFGYIHAVKMTHDDNILLKRTGYLAVTLFLNEDHDLIILIVNTIQKDLKSDNYLVVCAALNAVCRLINEETIPAVLPQVIELLGHSKEAVRKKAIMALHRFYQKSPSSVSHLISNFRKRLCDNDPGVMGATLCPLFDLIMNDVNSFKDLVISFVSILKQVAERRLPKSYDYHQIPAPFIQIKLLKILALLGSGDKQASENMYTVVSDIIRKGDSSSNIGNAILYECICCAASIYPNPKLIEAAADVVAKFLKSDTHNLKYMGIDALGRLIKLSPQIAEQHQLAVIDCLEDPDDTLKRKTFELLYKMTKSSNVEVIVDRMIEYMISISDDHYKTYIASRCVELAEQFAPSNHWFIQTMNKVFEHAGDLVNVKVAHNLMRLIAEGFGEDDDAADSQLRSSAVESYLRIVGEPKLPSVFLQVICWVLGEYGTADGKHSASYITGKLCDVAEAYSNDVTVKAYATSALMKIYAFEVAAGRKVDLLPECQTLIEEMLASHSTDLQQRAYELQALIGLDRQVVEAIMPQDASCEDIEVDRNLSFLNDYVQQSIERGAQPYIPEDVRAGMDDMSNFRGQDKHEPSHHVLRFEAYELPKAPTVSIASSTDLVPVPEALYSRESHQISSAASASEAGSSGLKLRLDGVQRKWGRPTYSTPAPSNTLESSSQKPVNGMTQGNGASAVNSKVRDSYDSRKTPVEISPEKQKLAGLLFGGSSKPERKSSAGHKAPKANASAADRSQESKIAVASDEAAGEKTNHQPAPDLLDLGEPTVTTAPPSVVDPFKQLEGLLDASPGSTIDHSAGATAKVPDIMTLYGGTTTGEQSASGGYSIPVSGEGNLLSGLSNAPATVTSSPQSVKGPNAKESLEKDALVRQSGVNPSSQNPNLFKDLLG 957
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele51g0839 957 PANTHER ADAPTIN, ALPHA/GAMMA/EPSILON 15 813 - -
Lele51g0839 957 Pfam Adaptin N terminal region 49 582 IPR002553 GO:0006886|GO:0016192|GO:0030117
Lele51g0839 957 SUPERFAMILY ARM repeat 10 587 IPR016024 -
Lele51g0839 957 MobiDBLite consensus disorder prediction 905 925 - -
Lele51g0839 957 MobiDBLite consensus disorder prediction 905 957 - -
Lele51g0839 957 MobiDBLite consensus disorder prediction 714 830 - -
Lele51g0839 957 MobiDBLite consensus disorder prediction 939 957 - -
Lele51g0839 957 PIRSF AP4_epsilon 918 957 IPR017109 GO:0015031|GO:0030124
Lele51g0839 957 PIRSF AP4_epsilon 1 829 IPR017109 GO:0015031|GO:0030124
Lele51g0839 957 Gene3D - 3 594 IPR011989 -
Lele51g0839 957 MobiDBLite consensus disorder prediction 718 752 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele51g0839 Lele-ChrLele51 5103402 5111009 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele51g0839 51 5103402 5111009 Lele51g0839 51 5103402 5111009 ECH
Lele49g0816 49 5002198 5010113 Lele51g0839 51 5103402 5111009 hybridization
Lele50g0853 50 5327034 5333856 Lele51g0839 51 5103402 5111009 hybridization