Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele51g0793 ATGGCGATTGCTTCTTACTCAACTCCGAGCTTCTCACCTTCTTTCTGCTCCACTCGGACCCAATTCACTGGCCTATCGCGCTTCCCCTCCGTCATCTTGTCTCAGTCTCGCTCAAACCAAACTCGCTCTTTAACTCGTCGACTTGTCGTATCGTCTCGGCTCAATTCGTCTAAATTCTCCGGTGCTGATGGATTTGTCTCGCCGGACAATGAAGATTTCCCCTACGAACTCCAACACGATTTTTCACCTCAGCGTCAGAGGAAGGGGTCACCGGTATACGTCACGCTTCCGTTAGATGCCGTGGGCCCGGAGGGGCGAGTCTTGAGGGTGAAAACTATGACGGTCTCGTTCAGGACGCTCGCATTGGTTGGAGTAGAAGGCGTGGTTTTGGAGATTTGGTGGGGTTTAGTTGAGAGGAATGAACCTATGGTTTATGATTGGCGAGGGTATTTGCAACTCATCAAGATGGCTGGAACGTGCGGCCTGAAGGTTCGAGTTGTCCTTGCGTTTCATCAGTGCGGCACGGACCCTACTGATCCTAAATGGGAAGCAAAGCATGACCTGATGAAGTCTATCAGATTCTCTTGCATCTGGCCTTACTTTGGCATTATCATAACAGGAATACAGATTGGTATGGGTCCTGGTGGCGAATTAAGATATCCTTCATGCCCTCCTCAATTAATCCATGCTAGGCACTCTGGATTTGGGGAATTTCAGTGCTATGATAAGTATATGATTGCATCCCTAAAAGCTTGTGCAAGTGATATTGGAATGGATGAATGGGGACAAGGTGCTCCACATGATACTGGAAGTTTCAAGATCAATTTATTTTCTACTAGTGAGTATGGCCCTTGGACCACGGCACAGGGTAGATTTTTCCTTGAGTGGTACTCAGGGATGCTGCTACTGCATGGGGAAAGAATTTGTAGGGTAGCTGAAACTATATTTAGGGATACAGAAGTCAATTTGTCAGCAAAAGTGGCTGCTATTCACAGGCACTATCAGACTCGTTCCCATCCATCAGAGTTAACCGCAGGATATTACAATACTTATGGCAGGGATGGATACTTACCCATTGCTCGCATGTTTAGTAGGTATGGATTTGGCTTATGCTGCTCGTGCTTTGAAATGCAAGATGCAGTAGAAAATAAGATAAACCCAGTTGGCAGCCCGGAAGGTTTGCTTAAACAGCTGCTGTTGGCTGCTAGGTTCTGTGACATACAACTGGAAGGTCAAAATATTTCATCCGATTTCAATGATATATCATTCGAGCAGGTGCTGAAGATGTCAGAGTTTTACATGGATGGGGTTGAAAAGCGTCCCTTCTCTTTCAACTTGGTGAGAATGAGCGGGAAAGTGTTTGAATCTCGTTTTTGGGATCGATTTACTCGTTTTGTGAGGCAAATGTCAATGCCAGGTGGAAATAATTATTTTCGAGCCAGATTAAATCTGTCACCGACGTGCGTCTCAAGTCCTTGA 1479 0.4604 MAIASYSTPSFSPSFCSTRTQFTGLSRFPSVILSQSRSNQTRSLTRRLVVSSRLNSSKFSGADGFVSPDNEDFPYELQHDFSPQRQRKGSPVYVTLPLDAVGPEGRVLRVKTMTVSFRTLALVGVEGVVLEIWWGLVERNEPMVYDWRGYLQLIKMAGTCGLKVRVVLAFHQCGTDPTDPKWEAKHDLMKSIRFSCIWPYFGIIITGIQIGMGPGGELRYPSCPPQLIHARHSGFGEFQCYDKYMIASLKACASDIGMDEWGQGAPHDTGSFKINLFSTSEYGPWTTAQGRFFLEWYSGMLLLHGERICRVAETIFRDTEVNLSAKVAAIHRHYQTRSHPSELTAGYYNTYGRDGYLPIARMFSRYGFGLCCSCFEMQDAVENKINPVGSPEGLLKQLLLAARFCDIQLEGQNISSDFNDISFEQVLKMSEFYMDGVEKRPFSFNLVRMSGKVFESRFWDRFTRFVRQMSMPGGNNYFRARLNLSPTCVSSP 492
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele51g0793 492 PRINTS Beta-amylase (glycosyl hydrolase family 14) signature 338 349 IPR001554 GO:0000272|GO:0016161
Lele51g0793 492 PRINTS Beta-amylase (glycosyl hydrolase family 14) signature 356 379 IPR001554 GO:0000272|GO:0016161
Lele51g0793 492 PRINTS Beta-amylase (glycosyl hydrolase family 14) signature 145 163 IPR001554 GO:0000272|GO:0016161
Lele51g0793 492 PRINTS Beta-amylase (glycosyl hydrolase family 14) signature 394 416 IPR001554 GO:0000272|GO:0016161
Lele51g0793 492 PRINTS Beta-amylase (glycosyl hydrolase family 14) signature 124 138 IPR001554 GO:0000272|GO:0016161
Lele51g0793 492 Gene3D Glycosidases 185 486 - -
Lele51g0793 492 Gene3D Glycosidases 81 184 - -
Lele51g0793 492 SUPERFAMILY (Trans)glycosidases 88 471 IPR017853 -
Lele51g0793 492 PANTHER BETA-AMYLASE 1, CHLOROPLASTIC 186 471 IPR001554 GO:0000272|GO:0016161
Lele51g0793 492 Pfam Glycosyl hydrolase family 14 93 176 IPR001554 GO:0000272|GO:0016161
Lele51g0793 492 Pfam Glycosyl hydrolase family 14 186 465 IPR001554 GO:0000272|GO:0016161
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele51g0793 Lele-ChrLele51 4794347 4797232 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele51g0793 45 473 Glycoside Hydrolase AT4G17090 38.430 7.07e-102 314
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele51g0793 51 4794347 4797232 Lele51g0793 51 4794347 4797232 ECH
Lele49g0770 49 4671487 4674364 Lele51g0793 51 4794347 4797232 hybridization
Lele50g0811 50 4988503 4991371 Lele51g0793 51 4794347 4797232 hybridization