Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele51g0776 ATGGGATGTACTTGCTCCAAACAACGTCTTGCGCATGAAGATCCGGCAGTTCTTGCTACCCAAACCTGCTGACTGTATGAGTTGTTCAAGGAGCTGAATAGTTCTGCAGTCGATGACGGGCTTATCAGCAAAGATGAGTTTCAGCTGTGCTTACTCGGAAGTAACAAGATACAGAGTCTATGTGCAGACAGGGTTTTTCATTTATTTGACTCAAAAAATGGAGTAATAGAATTTGGAGAGTTTGTTCGAGCACTGAGTGTCTTTCATCCAGCTGCACCACAGGCACAGAAAGCAGCTTGTACTGTATTTCCTCTCAAGACTGAGTTCCAATGCTTTAAATTCCATAATTCTTATTCTAAGTCTTGA 366 0.4208 MGCTCSKQRLAHEDPAVLATQTCXLYELFKELNSSAVDDGLISKDEFQLCLLGSNKIQSLCADRVFHLFDSKNGVIEFGEFVRALSVFHPAAPQAQKAACTVFPLKTEFQCFKFHNSYSKS 121
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele51g0776 121 PANTHER CALCINEURIN B 1 100 IPR045198 GO:0005509|GO:0019722|GO:0019900
Lele51g0776 121 SUPERFAMILY EF-hand 22 96 IPR011992 -
Lele51g0776 121 Gene3D - 17 116 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele51g0776 Lele-ChrLele51 4684266 4684975 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele51g0776 6 117 EF-hand Containing Proteins AT1G64480 45.833 2.06e-30 105
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele51g0776 51 4684266 4684975 Lele51g0776 51 4684266 4684975 ECH
Lele49g0751 49 4563097 4564474 Lele51g0776 51 4684266 4684975 hybridization
Lele50g0794 50 4894005 4895445 Lele51g0776 51 4684266 4684975 hybridization