Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele51g0759 ATGAGCTCTCAAGTCTGCAGATCCGCTTCTAGAGCGGTGAGATCTTTTCTATCTGCTTCTAAGGGCTCTCGCTTTTACTCCGAAGGAAGCACTGTAGCTGCTGCTGCTGTTTCAATCACAAGGAAAGTACCTCTTTTTGCTTCAAACATTGGGAACTCTGAATCTGGAAGTGGAACCAGAGCATGGCTTTCAGGGGTTCTCGCTCTTCCTTCTGCAGCTTACTTGCTCCAAGATCAAGAGGCACATGCTGCTGAGCTGGAGCGCACTTTCATTGCCATTAAGCCCGATGGAGTTCAAAGAGGGCTGATTTCAGAGATCATATATCGTTTTGAGCGGAAAGGGTACAAACTCGTGGGAATTAAAGTAGTGATTCCTTCAAAAGATTTTGCACAGAAGCATTATCATGACCTGAAGGAAAGACCCTTCTTCAATGGGCTTTGTGAATTCCTAAGCTCTGGTCCTGTCATTGCAATGGTCTGGGAAGGACAGGGAGTTATTTCCTATGGCCGAAAACTAATCGGGGCCACTGATCCACAGAAATCTGAGCCTGGCACCATCAGAGGTGATCTGGCTGTCGTTGTTGGAAGAAATATCATCCACGGGAGTGATGGACCAGAAACAGCCAAGGACGAAATTAAGTTGTGGTTTAAGCCAGAGGAGCTGGTAAATTACACGAGCAGTGCAGAAAAGTGGATTTACGGTGAAAACTGA 711 0.4641 MSSQVCRSASRAVRSFLSASKGSRFYSEGSTVAAAAVSITRKVPLFASNIGNSESGSGTRAWLSGVLALPSAAYLLQDQEAHAAELERTFIAIKPDGVQRGLISEIIYRFERKGYKLVGIKVVIPSKDFAQKHYHDLKERPFFNGLCEFLSSGPVIAMVWEGQGVISYGRKLIGATDPQKSEPGTIRGDLAVVVGRNIIHGSDGPETAKDEIKLWFKPEELVNYTSSAEKWIYGEN 236
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele51g0759 236 PANTHER NUCLEOSIDE DIPHOSPHATE KINASE 78 234 - -
Lele51g0759 236 FunFam Nucleoside diphosphate kinase 82 234 - -
Lele51g0759 236 Pfam Nucleoside diphosphate kinase 87 220 IPR034907 -
Lele51g0759 236 Hamap Nucleoside diphosphate kinase [ndk]. 86 221 IPR001564 GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241
Lele51g0759 236 SMART ndk_5 86 223 IPR034907 -
Lele51g0759 236 CDD NDPk_I 87 216 - -
Lele51g0759 236 ProSitePatterns Nucleoside diphosphate kinases active site. 197 205 IPR023005 -
Lele51g0759 236 Gene3D - 82 236 IPR036850 -
Lele51g0759 236 PRINTS Nucleoside diphosphate kinase signature 174 190 IPR001564 GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241
Lele51g0759 236 PRINTS Nucleoside diphosphate kinase signature 133 152 IPR001564 GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241
Lele51g0759 236 PRINTS Nucleoside diphosphate kinase signature 197 216 IPR001564 GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241
Lele51g0759 236 PRINTS Nucleoside diphosphate kinase signature 89 111 IPR001564 GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241
Lele51g0759 236 PRINTS Nucleoside diphosphate kinase signature 153 170 IPR001564 GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241
Lele51g0759 236 SUPERFAMILY Nucleoside diphosphate kinase, NDK 86 233 IPR036850 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele51g0759 Lele-ChrLele51 4601084 4603464 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele51g0759 51 4601084 4603464 Lele51g0759 51 4601084 4603464 ECH
Lele49g0738 49 4492554 4493928 Lele51g0759 51 4601084 4603464 hybridization
Lele50g0779 50 4804880 4811361 Lele51g0759 51 4601084 4603464 hybridization