Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele51g0697 ATGTCTCCAGTTCGTAGATTCACAATGGCAGCTATCTCTAATTCCTTGTCCCTGAAGCACTGTCTCTCACTTTGGTGTCCTCAAACCGGGTCTCTCAATCGAGCTAACCCTTCTTCAATCACGTTCAGAACCTTCTCGAGATGCTACGCCGCTTTCGCTAATGAAAATCGGGAGTATGTTATTGTTGGGGGTGGAAATGCCGCAGGATATGCTGCTCGAACTTTCGTTGAGCACGGCATGGCGGATGGACGTCTATGTATTGTGACTAAAGAGGCATATGCGCCTTACGAGCGTCCGGCTTTAACAAAAGGTTATCTATTCCCGCCAGATAAGAACCCTGCGCGCCTTCCTGGATTTCACACTTGTGTTGGATCCGGTGGTGAGAGGCAGACTCCAGAGTGGTATGAGGAGAAAGGGATAGAGATGATATATCAAGATCCAGTAAAAAGCATTGATATTGAACAGCAAGCGTTGACAACAAATTCAGGAAAGCGGCTTAAGTATGGTTCACTTATTATTGCGACAGGATGTACAGCCTCAAGATTCCCAGAGAAAATTGGGGGCAATCTACCTGGTGTTCATTACATCCGTGATGTTGCAGATGCTGATTCTCTGGTTTCATCATTGGGGAAAGCACGCAAGGTAGTTGTTGTTGGAGGTGGTTATATAGGAATGGAAGTTGCTGCTGCTGCTGTTGGCTGGCAGCTTGATACAACAATTATATTTCCAGAGGATCATTTATTGCAAAGACTATTCACTTCTTCTCTTGCTCGAAGATATGAAGAACTCTACCAGAAGAATGGTGTCAAAATCTTAAAGGGTGCTTCTATAAAAAACTTGGAAGCCGATTCTAATGGCCATGTAACTGCTGTGAAACTTGGAGATGGATCTACTATAGATGCAGATACAGTAATTGTGGGCATTGGAGCAAAACCTGCAGTTGGTCCCTTTGAGAGGGTAGGTTTGAATAGAGATATTGGTGGCATACAGGTGGATGGTCTGTTTCGGACGAGCACTCCTGGAATCTTTGCCATTGGTGATGTAGCAGCTTTCCCACTGAAGATATACGATCGTATCACTCGAGTTGAACATGTGGATCATGCTCGTCGCTCTGCACATCATTGTGTGAAAGCATTACTCAGTGCACAAACTCACACGTATGATTATCTTCCATACTTCTACTCAAGGGTGTTTGAATATGAAGGGAGCTCCAGGAAAGTTTGGTGGCAATTTTTTGGAGACAATGTTGGGAAAACAGTTGAAATTGGGAATTTCGATCCTAAAATTGCTACATTCTGGATTGAATCAGGCAAGCTAAAAGGAGTTCTCCTTGAAAGTGGGAGCGCTGAGGAATTTCAACTGCTGCCCAAACTTGCCAGAAGTCAGCCTGTGGTTGATAAAGCCAAACTTGAGAAGGCATCTTCAGTGGAGGAGGCCCTAGCCATTGTTGGGGCATCCTTGGGTTGA 1467 0.4485 MSPVRRFTMAAISNSLSLKHCLSLWCPQTGSLNRANPSSITFRTFSRCYAAFANENREYVIVGGGNAAGYAARTFVEHGMADGRLCIVTKEAYAPYERPALTKGYLFPPDKNPARLPGFHTCVGSGGERQTPEWYEEKGIEMIYQDPVKSIDIEQQALTTNSGKRLKYGSLIIATGCTASRFPEKIGGNLPGVHYIRDVADADSLVSSLGKARKVVVVGGGYIGMEVAAAAVGWQLDTTIIFPEDHLLQRLFTSSLARRYEELYQKNGVKILKGASIKNLEADSNGHVTAVKLGDGSTIDADTVIVGIGAKPAVGPFERVGLNRDIGGIQVDGLFRTSTPGIFAIGDVAAFPLKIYDRITRVEHVDHARRSAHHCVKALLSAQTHTYDYLPYFYSRVFEYEGSSRKVWWQFFGDNVGKTVEIGNFDPKIATFWIESGKLKGVLLESGSAEEFQLLPKLARSQPVVDKAKLEKASSVEEALAIVGASLG 488
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele51g0697 488 Gene3D - 392 478 IPR016156 GO:0016491|GO:0050660
Lele51g0697 488 SUPERFAMILY FAD/NAD(P)-binding domain 53 379 IPR036188 -
Lele51g0697 488 PRINTS FAD-dependent pyridine nucleotide reductase signature 214 232 - -
Lele51g0697 488 PRINTS FAD-dependent pyridine nucleotide reductase signature 301 317 - -
Lele51g0697 488 PRINTS FAD-dependent pyridine nucleotide reductase signature 168 186 - -
Lele51g0697 488 PRINTS FAD-dependent pyridine nucleotide reductase signature 327 349 - -
Lele51g0697 488 PRINTS FAD-dependent pyridine nucleotide reductase signature 60 79 - -
Lele51g0697 488 Pfam Pyridine nucleotide-disulphide oxidoreductase 58 372 IPR023753 GO:0016491
Lele51g0697 488 Gene3D - 182 309 IPR036188 -
Lele51g0697 488 Gene3D - 60 374 IPR036188 -
Lele51g0697 488 PRINTS Pyridine nucleotide disulphide reductase class-I signature 342 349 - -
Lele51g0697 488 PRINTS Pyridine nucleotide disulphide reductase class-I signature 58 80 - -
Lele51g0697 488 PRINTS Pyridine nucleotide disulphide reductase class-I signature 214 239 - -
Lele51g0697 488 PRINTS Pyridine nucleotide disulphide reductase class-I signature 302 316 - -
Lele51g0697 488 PANTHER APOPTOSIS-INDUCING FACTOR 1 57 479 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele51g0697 Lele-ChrLele51 4206904 4211132 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele51g0697 171 418 Acyl Lipid Metabolism Gene Families AT3G17240 24.812 4.67e-11 63.2
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele51g0697 51 4206904 4211132 Lele51g0697 51 4206904 4211132 ECH
Lele49g0678 49 4116465 4120564 Lele51g0697 51 4206904 4211132 hybridization
Lele50g0710 50 4372289 4376368 Lele51g0697 51 4206904 4211132 hybridization