Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele51g0678 ATGAGGAAGGGCCGACGAAATAAGGGAGCCGGTTTGGGGCCACGGGCCATTCACGTTACGATGAATCTTCTGGAGCGCATTAGAGAAAGCCCGCTATCAGATCTTCAGGGATTCAAAACTCAAAAGGGTAGCCCCCACCCCTCTCCTTGCCTCCATTCCTTTCTTTCGTACAGCGGGGAAACCGTCAAAAGTTGGGATAGGAAGGACATGGCATGGGCATATAAACCAATAGAAGTGCTAACGAAGGTTGAAAATGTAAAACAACGATGCTTGCCAAATGCATTGAACTATCCCATGTGGGAGGAGTACGACTTTAGAAATGATACAGCAAATGTACAGTGTGCTGAAGTATGGTGTCCAATGACAAAAGAATTTTTTGCTGAGTATCTGAAGAAGGATAATTCCAAGAAGAGGCAGCGTGGTGATAAAATTATAGTCTTTGCTGATAATCTTTTTGCTCTAACTGAGTACGCCATGAAACTTCGCAAACCAATGATATACGGTGCCACAAGCCATGTTGAGAGGACAAAAATTCTACAAGCATTCAAAACAAGCAAAGATGTCAACACTATATTCCTTTCCAAGATGGGTGATAACTCAATTGATATTCCAGAAGCAAATGTGAAAATTCAGATCTCTTCACATGCTGGTTCAAGGCGTCAAGAAGCCCAACGTCTAGGTCGTATTCTTAGGGCAAAGGGCAAGCTTCAGGATAGGATGGCAGGTGGTAAGGAGGAGTATCATGCATTCTTTTATTCTCTCGTGTCAATAGATACCCAGGTGGGTGGTTGTTCAAATAAAGCACTCTCACGAACATTTGCCTATCCGTATTTGCATGAATGTGTAATTACAAGCTTACCTCCAGCTGGAGAAGAAGCTTCATTGAGCTATTACCATCTTGAAGATCAATTGGCGCTTCTCGGAAAGGTCATGAGTGCTGGTGACGATGCTGTTTGTCTAGAGCAACTCGAAGAAGATGCAGATGAAATAGCTCTTCACAATGCCCGGCGTTTGATAGGATCCATGAGTGCCATGTCGGGCGCAAAGGGAATGGTTTACCTGGAGTACAGTACCGGGCGTAACAAAGGTCAAGAGCAGATCAAGAGCAAGCCGAAAGATCCAGCCACACATTTTATGGCTCATAGAAAGTGTACTTGCACCGGAGTTGAAGACCATGGTTGGTCTGAGATGATAATGGCAATTGGAGATGAGGCTTTGTGA 1221 0.4439 MRKGRRNKGAGLGPRAIHVTMNLLERIRESPLSDLQGFKTQKGSPHPSPCLHSFLSYSGETVKSWDRKDMAWAYKPIEVLTKVENVKQRCLPNALNYPMWEEYDFRNDTANVQCAEVWCPMTKEFFAEYLKKDNSKKRQRGDKIIVFADNLFALTEYAMKLRKPMIYGATSHVERTKILQAFKTSKDVNTIFLSKMGDNSIDIPEANVKIQISSHAGSRRQEAQRLGRILRAKGKLQDRMAGGKEEYHAFFYSLVSIDTQVGGCSNKALSRTFAYPYLHECVITSLPPAGEEASLSYYHLEDQLALLGKVMSAGDDAVCLEQLEEDADEIALHNARRLIGSMSAMSGAKGMVYLEYSTGRNKGQEQIKSKPKDPATHFMAHRKCTCTGVEDHGWSEMIMAIGDEAL 406
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele51g0678 406 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 129 258 IPR027417 -
Lele51g0678 406 PANTHER RAD25/XP-B DNA REPAIR HELICASE 110 139 - -
Lele51g0678 406 SMART helicmild6 155 233 IPR001650 -
Lele51g0678 406 Gene3D - 106 321 IPR027417 -
Lele51g0678 406 ProSiteProfiles Superfamilies 1 and 2 helicase C-terminal domain profile. 122 273 IPR001650 -
Lele51g0678 406 Pfam ERCC3/RAD25/XPB C-terminal helicase 138 329 IPR032438 -
Lele51g0678 406 CDD SF2_C_XPB 114 255 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele51g0678 Lele-ChrLele51 4114383 4122168 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele51g0678 51 4114383 4122168 Lele51g0678 51 4114383 4122168 ECH
Lele49g0661 49 4020229 4026874 Lele51g0678 51 4114383 4122168 hybridization
Lele50g0691 50 4270348 4279314 Lele51g0678 51 4114383 4122168 hybridization