Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele49g0661 ATGATGACTTTTTTCCAGGTCGTGAAAAACATCTATGAATCATTTGTTTGCGATGAACTTGAATGGTTTGTAGCAGAAGCCAAGACCAAAGATTTCAGCAAATTAGAGCTGAAAAAGGATCGTGCCAATAGACCACTTGGGGCTTGTGGCAATGGTCGGATATTCCTCGAGACCTTCTCTCCCTTGTACAAACAAGCTTACGATTTCCTTATTGCCATAGCGGAACCCGTTTGCAGTTGGCCTGGAACGATCATATCAGTTTTGAATCAGTTATCCAAGACTATGCTCCCTAAAGAGATGATTATGTTTATTCAGGATTCAACTGCAAATTATGGCAAAGTAAAGCTTGCACTTAGGAAAAATGATACTTTATTGAATCTCCATTTCCAGAGACACTGCTCAGAGATGAAGTTATATCTCGATCAAGGATCACTTCTGAGGGGATGGTTGAGGGACGTGCTTGGGGGTGTAAATAGAGATGGATTTACAATTAGCAAAACAGCAGGTGAAATTGAAGGCACTCACGATGAGTTGATGAATGAAGCAGAAGTATCTGCAGCTGCAGAAGAGAAAGAAACTCATTCATTTGAAATTGATCCTTCTCAGGACAACCCTGATCTGGATATGGAACTAAAGCCTCAAGCACAGCCACGGCCATATCAAGAGAAGAGCTTGAGTAAAATGTTTGGAAATGGTAAGGCAGATAGCTGTAGAGCAAGATCCGGTATCATAGTTCTACCTTGTGGTGCTGAATCTGAGAAGATCATTGAAGAAATTAGAAACAGAGAATGGGGATTGCTTCTCATGGATGAGGTACATGTGGTTCCTGCACATATGTTTCGGAAGGTCATCAGCCTCACTAAATCTCACTGCAAACTTGGGTTCACAGCCACACTTGTGAGAGAGGATGAAAGGATTACGGATCTGAATTTTCTCATTGGTCCCAAGCCATATGAATCAAATTGGTTGGATCTAGTGAAAGGTGGGTTTATTGCAAATGCACAGTATGCTGAAGTATGGTGTCCAATGACAAAAGAATTTTTTGCTGAGTATCTGAAGGAGAATTCCAAGAAGAGCTTTCTGTCGCATCAGTTCTACTTATATGGTGAACTGGCTGTTTTGAATTTGATTCTGCGCTCTAGCTATGTTGAGAGGACAAAAATCCTACAAGCATTCAAAACTAGCAAAGATGTCAGCACTATATTCCTTTCCAAGATCTCTTCACATGCTGGTTCAAGGCGTCAAGAAGCCCAATGTCTAGGTCGTATTCTTAGGGCAAAGCTTCAGGATAGGATGGCAGGTGGTAAGGAGGAGTATAATGCATTATTTTCTTCTCTCGTGTCAACAGATACCCAGGTAATTACAAGCTTACCTCCAGCTGGAGAAGAAGCTTCATTGAGTTATTACCATCTTGAAGATCAATTGGCGCTTCTCGGAAAGGTCTTGAGTGCTGGTGATGATGCTGTTGGTCTAGAGCAACTCGCAGGAGATGCAGATGAAATAGCTCTTAACAATGCCCGGCGTTCGATAGGATCCATGAGTGCCATGTCGGGCGCAAAGGGAATGGTTTACATGGAGTACAGTACCGGGCGTAACAAAGGTCAAGGACAGATCAAGAGCAAGCTGAAAGATCCAGCCAAGCGACACTTTCTATTTAAAAGACTCTATGGCTCATAG 1677 0.424 MMTFFQVVKNIYESFVCDELEWFVAEAKTKDFSKLELKKDRANRPLGACGNGRIFLETFSPLYKQAYDFLIAIAEPVCSWPGTIISVLNQLSKTMLPKEMIMFIQDSTANYGKVKLALRKNDTLLNLHFQRHCSEMKLYLDQGSLLRGWLRDVLGGVNRDGFTISKTAGEIEGTHDELMNEAEVSAAAEEKETHSFEIDPSQDNPDLDMELKPQAQPRPYQEKSLSKMFGNGKADSCRARSGIIVLPCGAESEKIIEEIRNREWGLLLMDEVHVVPAHMFRKVISLTKSHCKLGFTATLVREDERITDLNFLIGPKPYESNWLDLVKGGFIANAQYAEVWCPMTKEFFAEYLKENSKKSFLSHQFYLYGELAVLNLILRSSYVERTKILQAFKTSKDVSTIFLSKISSHAGSRRQEAQCLGRILRAKLQDRMAGGKEEYNALFSSLVSTDTQVITSLPPAGEEASLSYYHLEDQLALLGKVLSAGDDAVGLEQLAGDADEIALNNARRSIGSMSAMSGAKGMVYMEYSTGRNKGQGQIKSKLKDPAKRHFLFKRLYGS 558
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele49g0661 558 MobiDBLite consensus disorder prediction 189 209 - -
Lele49g0661 558 ProSiteProfiles Superfamilies 1 and 2 helicase ATP-binding type-1 domain profile. 253 317 IPR014001 -
Lele49g0661 558 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 261 319 IPR027417 -
Lele49g0661 558 Pfam ERCC3/RAD25/XPB C-terminal helicase 380 453 IPR032438 -
Lele49g0661 558 Pfam ERCC3/RAD25/XPB C-terminal helicase 325 359 IPR032438 -
Lele49g0661 558 Gene3D - 251 328 IPR027417 -
Lele49g0661 558 PANTHER RAD25/XP-B DNA REPAIR HELICASE 251 360 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele49g0661 Lele-ChrLele49 4020229 4026874 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele49g0661 49 4020229 4026874 Lele49g0661 49 4020229 4026874 ECH
Lele49g0661 49 4020229 4026874 Lele51g0678 51 4114383 4122168 hybridization
Lele49g0661 49 4020229 4026874 Lele52g0683 52 4322603 4329356 hybridization