Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele51g0673 ATGTCTGAACCGCTTTGGGGTGTCCTCCTGTTTGTGGAGGAAGCGTTTATCTTCTCCTTCCATCTTTTGTTCTCAGCCTCTCACCCAGACTTCACTCCACAGTCAAGAAAAGATGATGAGCGATTACAAGGTCCTTATCATGAAGGTGTATGGAAGATTAGAGTAGAGCTGCCTGATGCTTATCCTTATAAATCTCCATCCATTGGTTTTGTCAATAAAATATACCACCCTAATGTTGATGAAATGTCTGGCTCAGTTTGCTTAGATGTTATTAACCAGACCTGGAACCTTGTTAATGTATTTGAAGTTTTTCTTCCCCAACTTCTTCTGTACCCCAACCCATCAGATCCATTGAATGGTGAAGCTGCTGCATTGATGATGCGTGATCGTGCTGCGTATGATCAAAAAGTCAAAGAGTATCGGGAAAAGTATGCCAAGCCAGAAGATGTTGGTGCTACACAGGACGAAAAATCTAGTGATGATGAGGAGCTGAGTGAAGACGATTATGGCTCAAGTGATGAGGCAATTGCAGGGCAACCTGATCCTTGA 549 0.4299 MSEPLWGVLLFVEEAFIFSFHLLFSASHPDFTPQSRKDDERLQGPYHEGVWKIRVELPDAYPYKSPSIGFVNKIYHPNVDEMSGSVCLDVINQTWNLVNVFEVFLPQLLLYPNPSDPLNGEAAALMMRDRAAYDQKVKEYREKYAKPEDVGATQDEKSSDDEELSEDDYGSSDEAIAGQPDP 182
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele51g0673 182 SMART ubc_7 8 146 - -
Lele51g0673 182 MobiDBLite consensus disorder prediction 142 158 - -
Lele51g0673 182 FunFam ubiquitin-conjugating enzyme E2 H isoform X2 41 157 - -
Lele51g0673 182 Gene3D Ubiquitin Conjugating Enzyme 39 159 IPR016135 -
Lele51g0673 182 ProSiteProfiles Ubiquitin-conjugating (UBC) core domain profile. 1 146 IPR000608 -
Lele51g0673 182 ProSitePatterns Ubiquitin-conjugating (UBC) active site signature. 75 91 IPR023313 -
Lele51g0673 182 PANTHER UBIQUITIN-CONJUGATING ENZYME E2 43 134 - -
Lele51g0673 182 SUPERFAMILY UBC-like 43 146 IPR016135 -
Lele51g0673 182 MobiDBLite consensus disorder prediction 142 182 - -
Lele51g0673 182 Pfam Ubiquitin-conjugating enzyme 43 140 IPR000608 -
Lele51g0673 182 CDD UBCc 45 140 IPR000608 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele51g0673 Lele-ChrLele51 4086443 4089415 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele51g0673 51 4086443 4089415 Lele51g0673 51 4086443 4089415 ECH
Lele49g0657 49 3985742 3988713 Lele51g0673 51 4086443 4089415 hybridization
Lele50g0687 50 4244723 4248400 Lele51g0673 51 4086443 4089415 hybridization