Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele49g0657 ATGTCTGAACGCTTTGGGGTGTCCTCCTGTTTGTGGAGGAAGCGTTTATCTTCTCCTTCCATCTTTTGTTCTCAGCCTCTCACCCAGACTTCACGCCACACTCAAGAAAAGATGATGAGCGATTACAAGGTAGAGATGATCAATGATGGCATGCAGGAGTTTTATGTGCACTTTCATGGGCCTAAAGACAGTCCTTATCATGAAGGTGTATGGAAGATTAGAGTAGAGCTGCCTGAGGCTTATCCTTATAAATCTCCATCCATTGGTTTTGTCAATAAAATATACCACCCTAATGTTGATGAAATGTCTGGCTCAGTTTGCTTAGATGTTATTAACCAGACCTGGAGTCCCATTACCTCTGGATTTCACCCGTTTTTTTTCCAATTTTTATTTTCAGACCTTGTTAATGTATTTGAAGTTTTTCTTCCCCAACTTCTTCTGTACCCCAACCCATCAGATCCATTGAATGGTGAAGCTGCTGCACTGATGATGCGTGATCGTGCTGCATATGATCAAAAAGTCAAAGAGTATCGAGAAAAGTATGCCAAGCCAGAAGATGTTGGTGCTACGCAGGACGACAAATCTAGTGATGATGAGGAGCTGAGTGAAGACGATTATGGCTCAAGTGATGAGGCAATTGCAGGGCAACCTGATCCTTGA 660 0.4273 MSERFGVSSCLWRKRLSSPSIFCSQPLTQTSRHTQEKMMSDYKVEMINDGMQEFYVHFHGPKDSPYHEGVWKIRVELPEAYPYKSPSIGFVNKIYHPNVDEMSGSVCLDVINQTWSPITSGFHPFFFQFLFSDLVNVFEVFLPQLLLYPNPSDPLNGEAAALMMRDRAAYDQKVKEYREKYAKPEDVGATQDDKSSDDEELSEDDYGSSDEAIAGQPDP 219
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele49g0657 219 MobiDBLite consensus disorder prediction 179 219 - -
Lele49g0657 219 FunFam Ubiquitin-conjugating enzyme 5, E2 23 194 - -
Lele49g0657 219 Pfam Ubiquitin-conjugating enzyme 32 177 IPR000608 -
Lele49g0657 219 SMART ubc_7 25 183 - -
Lele49g0657 219 Gene3D Ubiquitin Conjugating Enzyme 22 195 IPR016135 -
Lele49g0657 219 CDD UBCc 35 177 IPR000608 -
Lele49g0657 219 PANTHER UBIQUITIN-CONJUGATING ENZYME E2 51 171 - -
Lele49g0657 219 MobiDBLite consensus disorder prediction 179 195 - -
Lele49g0657 219 SUPERFAMILY UBC-like 35 183 IPR016135 -
Lele49g0657 219 ProSiteProfiles Ubiquitin-conjugating (UBC) core domain profile. 22 183 IPR000608 -
Lele49g0657 219 ProSitePatterns Ubiquitin-conjugating (UBC) active site signature. 95 111 IPR023313 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele49g0657 Lele-ChrLele49 3985742 3988713 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele49g0657 49 3985742 3988713 Lele49g0657 49 3985742 3988713 ECH
Lele49g0657 49 3985742 3988713 Lele51g0673 51 4086443 4089415 hybridization
Lele49g0657 49 3985742 3988713 Lele52g0677 52 4292286 4294915 hybridization