Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele51g0671 ATGGCGCGATACCGGGCTTTCAACCTCTGGTTCCATTGTGAGCTGTTTGAAAAGGTTCTTAGCTTCCGGGAGTTGATGCTTCAGGTAACTGGCCGTGTTAACTATTTTGAGAATACAGCAAAGAATAGCATCGTATTGAGGCGTTTCCTTGCTTCACAGGCCATTTTCCGACAGAGGTGTTGCCGACTTCACCCTTCATTTTCTTCAAGAGTTAAGCAAGTGAACAGGAGGCTAGTTTGTTCAGTTGCCACAGAGGACTTGTCGAAGCAAGTTGAAGAACCTAATATGGAGTCACCGAGAGAAATATTCTTGAAGGATTATAAGATGCCTGATTACTACTTTGACACAGTGGATCTGAGATTTTCCTTGGGTGAGGAGAGCACAATAGTTAGCTCAAAAATTACTGTGTTTCCTCGCATTGAAGGTTCTTCTCCCCCACTTGTTTTGGATGGACAGGACTTAAAATTGATTTCAATTCTGCTGAATGGCAAAGCACTGAAGGAGGATGATTACCAATTGGGTGCACGGCGTCTAACCATCCACTCACCTCCTAGTGGTAAATTTGTTCTAGAAATCGTAAATGAGATCTACCCACAGAAGAACACATCATTAGAGGGACTCTACAAGTCATCTGGAAATTTCTGCACTCAATGTGAGGCTGAAGGATTTCGTAAAATTACATTTTATCAGGATCGACCTGATATAATGGCAAAATATACATGTCACATTGAGGCAGATAAATCATTGTACCCGGTGTTGTTGTCTAATGGAAATCTGATTAAGCAAGGTGACTTGGAGAATGGAAAGCATTATGCTGTTTGGGAGGACCCCTTCAAGAAGCCTTCCTATTTGTTTGCTTTGGTTGCTGGGCAGTTACGGAGCAGAGATGACACATTCATCACGTGCTCTGGACGCAAGGTATCTCTAAGGATCTGGACCCCTGCTGAGGATGTACCAAAGACTGCACATGCAATGTATTCTCTAAAGGCAGCTATGAAGTGGGATGAAGATGTTTTTGGTCTTGAGTATGATCTGGATCTCTTCAATATTGTTGCTGTCCCTGATTTTAACATGGGAGCCATGGAAAACAAGAGTTTGAATATCTTCAACTCCAAGCTTGTTTTAGCGTCTCCAGAAACTGCTAGTGATGCAGATTATTCTGCAATATTGGGAGTTATCGGCCATGAGTATTTTCACAACTGGACTGGCAACAGAGTGACCTGTCGCGACTGGTTCCAGCTTAGCCTGAAGGAAGGTCTCACTGTTTTTCGTGATCAGGAATTTTCATCTGACATGGGAAGCCGCACTGTTAAACGAATTGCTGATGTTTCAAGACTTCGAAATTATCAATTTCCACAGGATGCTGGGCCCATGGCTCATCCAGTGCGACCGCACTCTTACATCAAGATGGACAACTTCTACACAGGCAAGTTTGTCTATGAGAAGGGGGCTGAAGTTGTCAGAATGTACAAAACCTTGTTGGGAAGTCAGGGATTTCGAAAAGGCATGGACTTATATTTTAAGAGACATGATGGGCAAGCTGTAACATGTGAAGATTTTTTTGCTGCAATGCGAGATGCAAATGATAGAGATTTTGCAAATTTTTTACTCTGGTACTCACAAGCTGGAACCCCTGTTATCAAAGTGAATTCCTCTTATAATCCCGAAGCACATACTTTTTCTTTAAAAATTAGCCAAGAGATTCCACCAACTCCTGGACAACCAGTTAAGGAATCCATGTTCATTCCTTTGGCAGTAGGTTTGCTTGATTCAACGGGCAAGGACATTCCTCTTTCAACTATATATTACGATGGAACTTTGCAGTCTGTTTCAAGAGATGGTCAACATGTCTCCACCACAGTTCTTCGGCTCACCAAGAAAGAAGAGGAATTTGTGTTCTCAGATGTATTTGAGAGGCCTGTCCCATCTCTATTACGGGGATACAGTGCTCCAATCCGTCTTGAATCAGATCTCACTGACAGTGACCTGTTTTTCCTACTGGCTAATGATTCAGATGAATTTAACCGTTGGGAGGCTGGGCAAATTCTGTCTCGTAAGCTGATGCTCAACTTGGTGGATGATTTCCAACATAACGAACCGCTAGCTCTGAATAACAAATTTGTGGGTGGTTTCAAGAGCATTCTATCTGACTCAAGCCTGGACAAAGAATTTGTTGCAAAGGCTATAACTTTGCCTGGTGAGGGAGAAGTAATGGACATGATGGAGGTTGCAGATCCTGATGCTGTTCATGCTGTTCGGACTTTTATCAGGAAACAGCTTGCAAGTGAATTGAGGGCAGAATTCCTCAGCACACTAAAAGATAACAGGAGCTCCGAAGAGTATGTGTTCAACCATCCTAACATGGCTAGACGTGCTTTGAAGAATGTTGCGCTTGCATATCTTGCCTCCCTGGAGGATCCAGAGATCACGGACATTGTGCTGCATGAGTATAATTCTGCCACAAATATGACTGAGCAATTTGCAGCTTTGGCAGCCATAGCCCAGAACCCTGGTAAGACGCGTGATGATGTTCTTGCTGACTTCTATGGCAAGTGGCAGCATGACTTCTTGGTGGTCAATAAATGGTTTGCACTTCAAGCAATGTCTGACATTCCTGGAAATGTTGAGAATGTGAAGCAACTGTTAAATCATCCAGCATTTGACCTGCGCAATCCAAACAAAGTGTATTCACTCATTGGAGGTTTCTGCGGATCTCCAGTGAACTTCCACGCAAAGGATGGATCGGGCTACAAGTTTTTGGGAGAAATTGTGCTGCAACTTGACAAAATCAATCCTCAAGTTGCCTCACGAATGGTGTCGGCCTTCTCTAGATGGAAGCGTTATGATGAAAACAGACAAAAGCTTGCCAAGGCCCAGCTGGAGCTAATTATGTCAGCTAATGGACTGTCAGAGAATGTGTATGAGATTGCCTCCAAAAGCTTAGCTGTTTAG 2952 0.4333 MARYRAFNLWFHCELFEKVLSFRELMLQVTGRVNYFENTAKNSIVLRRFLASQAIFRQRCCRLHPSFSSRVKQVNRRLVCSVATEDLSKQVEEPNMESPREIFLKDYKMPDYYFDTVDLRFSLGEESTIVSSKITVFPRIEGSSPPLVLDGQDLKLISILLNGKALKEDDYQLGARRLTIHSPPSGKFVLEIVNEIYPQKNTSLEGLYKSSGNFCTQCEAEGFRKITFYQDRPDIMAKYTCHIEADKSLYPVLLSNGNLIKQGDLENGKHYAVWEDPFKKPSYLFALVAGQLRSRDDTFITCSGRKVSLRIWTPAEDVPKTAHAMYSLKAAMKWDEDVFGLEYDLDLFNIVAVPDFNMGAMENKSLNIFNSKLVLASPETASDADYSAILGVIGHEYFHNWTGNRVTCRDWFQLSLKEGLTVFRDQEFSSDMGSRTVKRIADVSRLRNYQFPQDAGPMAHPVRPHSYIKMDNFYTGKFVYEKGAEVVRMYKTLLGSQGFRKGMDLYFKRHDGQAVTCEDFFAAMRDANDRDFANFLLWYSQAGTPVIKVNSSYNPEAHTFSLKISQEIPPTPGQPVKESMFIPLAVGLLDSTGKDIPLSTIYYDGTLQSVSRDGQHVSTTVLRLTKKEEEFVFSDVFERPVPSLLRGYSAPIRLESDLTDSDLFFLLANDSDEFNRWEAGQILSRKLMLNLVDDFQHNEPLALNNKFVGGFKSILSDSSLDKEFVAKAITLPGEGEVMDMMEVADPDAVHAVRTFIRKQLASELRAEFLSTLKDNRSSEEYVFNHPNMARRALKNVALAYLASLEDPEITDIVLHEYNSATNMTEQFAALAAIAQNPGKTRDDVLADFYGKWQHDFLVVNKWFALQAMSDIPGNVENVKQLLNHPAFDLRNPNKVYSLIGGFCGSPVNFHAKDGSGYKFLGEIVLQLDKINPQVASRMVSAFSRWKRYDENRQKLAKAQLELIMSANGLSENVYEIASKSLAV 983
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele51g0671 983 PANTHER PUROMYCIN-SENSITIVE AMINOPEPTIDASE 95 982 IPR012779 GO:0008270
Lele51g0671 983 CDD M1_APN 106 540 - -
Lele51g0671 983 Pfam Domain of unknown function (DUF3458) Ig-like fold 543 656 IPR035414 -
Lele51g0671 983 FunFam Puromycin-sensitive aminopeptidase 658 982 - -
Lele51g0671 983 SUPERFAMILY Metalloproteases ("zincins"), catalytic domain 302 549 - -
Lele51g0671 983 FunFam Aminopeptidase N 543 657 - -
Lele51g0671 983 FunFam Aminopeptidase N 378 542 - -
Lele51g0671 983 Pfam Peptidase family M1 domain 326 535 IPR014782 GO:0008237|GO:0008270
Lele51g0671 983 Gene3D - 658 982 IPR037144 -
Lele51g0671 983 TIGRFAM pepN_proteo: aminopeptidase N 106 981 IPR012779 GO:0008270
Lele51g0671 983 FunFam Aminopeptidase N 109 292 - -
Lele51g0671 983 Pfam Peptidase M1 N-terminal domain 119 284 IPR045357 -
Lele51g0671 983 SUPERFAMILY Leukotriene A4 hydrolase N-terminal domain 99 290 IPR042097 -
Lele51g0671 983 Gene3D - 293 377 - -
Lele51g0671 983 Gene3D Neutral Protease Domain 2 378 542 IPR027268 -
Lele51g0671 983 Pfam Domain of unknown function (DUF3458_C) ARM repeats 660 982 IPR024601 -
Lele51g0671 983 FunFam Putative aminopeptidase N 294 377 - -
Lele51g0671 983 Gene3D tricorn interacting facor f3 domain 109 292 IPR042097 -
Lele51g0671 983 PRINTS Membrane alanyl dipeptidase (M1) family signature 274 289 IPR001930 GO:0006508
Lele51g0671 983 PRINTS Membrane alanyl dipeptidase (M1) family signature 392 407 IPR001930 GO:0006508
Lele51g0671 983 PRINTS Membrane alanyl dipeptidase (M1) family signature 356 366 IPR001930 GO:0006508
Lele51g0671 983 PRINTS Membrane alanyl dipeptidase (M1) family signature 411 423 IPR001930 GO:0006508
Lele51g0671 983 Gene3D - 543 656 IPR038438 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele51g0671 Lele-ChrLele51 4066027 4073739 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele51g0671 51 4066027 4073739 Lele51g0671 51 4066027 4073739 ECH
Lele49g0654 49 3958455 3966067 Lele51g0671 51 4066027 4073739 hybridization
Lele50g0685 50 4227426 4230758 Lele51g0671 51 4066027 4073739 hybridization