Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele51g0652 ATGACTACCCAACCCACTAATCCAAAGTCTCTGTACGATTTTGTTGTCAAGGATGCTAAGGGCAATGATGTAGACCTTGCTGCTTACAATGGAAAAGTCCTTCTGATCGTCAATGTTGCTTCCAAATGTGGCATGACCAACTCAAATTATATGGAGTTGAATCAGTTATATGAGAAGTATAAAGATAAAGGCCTGGAGATACTGGCGTTTCCATGCAATCAGTTTGGTGAGGAAGAGCCTGGTACCAATGATCAAATTACAGAGTTTGTCTGCACTCGCTTCAAATCAGAATTTCCCATCTTTGATAAGATTGAAGTGAATGGTGAGAATGCTGCTCCAGTGTACAAGTTCTTGAAGACCGGCAAGTGGGGAATTATTGGGGATGATATTCAGTGGAACTTCGCCAAGTTTCTGGTTGACAAGAACGGTCAAGCCGTTGATCGTTATTATCCCACCACTTCTCCTCTCAGCCTTGAGCGAGACATCAAAAAGCTACTTGGTTTCTCTGGTCTGTATGCTCTTCGGCTGCACGCTATGACTACCGAACACACTAATCCAAAATCCGTGTACAATTTTGTTGTCAAGGATGCTAAGGGAAACGATGTTGAGCTTGCTACATACAGTGGAAAAGTGCTGCTCATCGTCAATGTTGCTTCCAAATGTGGTTTGACCAACTCAAATTATGCGGAGTTGAATGAATTATATGACAAGTATAAAGATAAAGGTCTGGAGATTCTGGGATTCCCATGCAATCAGCTTGGTAAATTGGAACCCGGAAGCAATGATGAAATTGTGGAGTTTGTTTGCACTCGCTTCAAATCAGAATTTCCCATCTTCCACAAGATTGAAGTGAATGGTGAGAATGCAGCTCCACTGTACAAGTTCTTAAAGTCATGCCAATGGGGAATTATAGGGGATGATATTCAGTGGAACTTCGCCAAATTTCTAGTTGACAAGAACGGTCAAGCAGTAGATCGCTATTATCCCACCACTTCTCCTCTCTGCATTGAGCGAGACATCAAAAAGCTGCTGGGTATCTTGTGA 1044 0.4234 MTTQPTNPKSLYDFVVKDAKGNDVDLAAYNGKVLLIVNVASKCGMTNSNYMELNQLYEKYKDKGLEILAFPCNQFGEEEPGTNDQITEFVCTRFKSEFPIFDKIEVNGENAAPVYKFLKTGKWGIIGDDIQWNFAKFLVDKNGQAVDRYYPTTSPLSLERDIKKLLGFSGLYALRLHAMTTEHTNPKSVYNFVVKDAKGNDVELATYSGKVLLIVNVASKCGLTNSNYAELNELYDKYKDKGLEILGFPCNQLGKLEPGSNDEIVEFVCTRFKSEFPIFHKIEVNGENAAPLYKFLKSCQWGIIGDDIQWNFAKFLVDKNGQAVDRYYPTTSPLCIERDIKKLLGIL 347
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele51g0652 347 ProSiteProfiles Glutathione peroxidase profile. 179 347 IPR000889 GO:0004602|GO:0006979
Lele51g0652 347 SUPERFAMILY Thioredoxin-like 10 166 IPR036249 -
Lele51g0652 347 ProSitePatterns Glutathione peroxidases active site. 209 224 IPR029759 -
Lele51g0652 347 ProSitePatterns Glutathione peroxidases active site. 31 46 IPR029759 -
Lele51g0652 347 PANTHER GLUTATHIONE PEROXIDASE 5 166 IPR000889 GO:0004602|GO:0006979
Lele51g0652 347 CDD GSH_Peroxidase 188 340 IPR000889 GO:0004602|GO:0006979
Lele51g0652 347 Gene3D Glutaredoxin 179 345 - -
Lele51g0652 347 ProSitePatterns Glutathione peroxidases signature 2. 68 75 IPR029760 -
Lele51g0652 347 ProSiteProfiles Thioredoxin domain profile. 5 167 IPR013766 -
Lele51g0652 347 CDD GSH_Peroxidase 10 162 IPR000889 GO:0004602|GO:0006979
Lele51g0652 347 Gene3D Glutaredoxin 2 168 - -
Lele51g0652 347 ProSiteProfiles Glutathione peroxidase profile. 1 172 IPR000889 GO:0004602|GO:0006979
Lele51g0652 347 SUPERFAMILY Thioredoxin-like 188 344 IPR036249 -
Lele51g0652 347 FunFam Glutathione peroxidase 2 168 - -
Lele51g0652 347 PRINTS Glutathione peroxidase family signature 130 139 IPR000889 GO:0004602|GO:0006979
Lele51g0652 347 PRINTS Glutathione peroxidase family signature 29 46 IPR000889 GO:0004602|GO:0006979
Lele51g0652 347 PRINTS Glutathione peroxidase family signature 65 81 IPR000889 GO:0004602|GO:0006979
Lele51g0652 347 FunFam Glutathione peroxidase 180 346 - -
Lele51g0652 347 ProSiteProfiles Thioredoxin domain profile. 183 345 IPR013766 -
Lele51g0652 347 Pfam Glutathione peroxidase 11 119 IPR000889 GO:0004602|GO:0006979
Lele51g0652 347 Pfam Glutathione peroxidase 189 297 IPR000889 GO:0004602|GO:0006979
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele51g0652 Lele-ChrLele51 3934727 3938876 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele51g0652 51 3934727 3938876 Lele51g0652 51 3934727 3938876 ECH
Lele49g0634 49 3829578 3830740 Lele51g0652 51 3934727 3938876 hybridization
Lele50g0663 50 4068642 4072210 Lele51g0652 51 3934727 3938876 hybridization