Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele51g0650 ATGAAATTCACCTATTCCAAGCATGATAGAAATTTCATGAGCGGTGATATGGAAGCAGATAGCCAAGCGAGAAAGGAAAAATATGCTGCTGATATTTCCTCCATAAAGGAAGCACACGCCCGAATAAAATCATTGATTCATAGAACACCAGTTCTTTCCTCTGAATCTCTGAATGCTATATCAGGAAGGCAGCTGTACTTTAAGTGTGAATGCTTCCAGAAGGGTGGAGCGTTTAAATTTAGAGGTGCCAGCAATGCTGTTTTCTCTCTTGATGATACTGATGCTTCCAAAGGCGTCTTAACACACAGCAGTGGTAACCATGCTGCAGCATTGGCTTTGGCGGCAAAGCTAAGGGGGATCCCTGCATATATTGTAATTCCAAAAAATGCTCCAACTTGCAAGGTTGAGAATGTAAAGCGTTATGGTGGTCAGATTATCTGGTCTGAAGCCTCTGTGAAGTCTCGGGAGGAAATTGCAAACAAAGTGTGGCAAGAGACTGGCGCAAATCTTATACATCCATATAATGATGGACGTATTTTGAGTGGCCAGGGTACCATATCATTGGAGCTACTGGAACAAGCTCCACAAATAGACACCCTAGTAGTTCCCATTAGTGGTGGTGGTCTGATATCAGGAGTAGCATTGGCTGCCAAATCCATCAACCCTGCTATGCGTATTTTAGCTGCTGAACCTAAAGGAGCTGATGACGCTGCACAATCTAAAGCAGCCGGGAGGATAATTACATTGCCTGAAACCAATACTATAGCTGACGGGCTTAGAGCTTTTCTTGGAGATTTAACATGGCCTGTGGTACGGGATCTTGTTGAAGACATTATAACTGTGGAAGACAGTGAAATAATGAAAGCCATGAAACTCTGTTTTGAGATTCTTAAGGTTGTCGTTGAACCAAGCGGAGCGGTTGGCCTTGCTGCTGTTCTATCGGATGCTTTTCAGAAAAATCCTGCTTGGCAGGACTGCAAACATATTGGAATTGTAGTTTCAGGAGGCAATGTCGATCTTGGAATGCTTTGGGAATCTTTGGAGAAATGA 1050 0.4333 MKFTYSKHDRNFMSGDMEADSQARKEKYAADISSIKEAHARIKSLIHRTPVLSSESLNAISGRQLYFKCECFQKGGAFKFRGASNAVFSLDDTDASKGVLTHSSGNHAAALALAAKLRGIPAYIVIPKNAPTCKVENVKRYGGQIIWSEASVKSREEIANKVWQETGANLIHPYNDGRILSGQGTISLELLEQAPQIDTLVVPISGGGLISGVALAAKSINPAMRILAAEPKGADDAAQSKAAGRIITLPETNTIADGLRAFLGDLTWPVVRDLVEDIITVEDSEIMKAMKLCFEILKVVVEPSGAVGLAAVLSDAFQKNPAWQDCKHIGIVVSGGNVDLGMLWESLEK 349
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele51g0650 349 Gene3D - 41 339 IPR036052 -
Lele51g0650 349 FunFam L-threonine dehydratase catabolic TdcB 148 339 - -
Lele51g0650 349 ProSitePatterns Serine/threonine dehydratases pyridoxal-phosphate attachment site. 70 83 IPR000634 GO:0006520|GO:0030170
Lele51g0650 349 PANTHER SERINE / THREONINE RACEMASE FAMILY MEMBER 21 342 - -
Lele51g0650 349 Gene3D - 78 174 IPR036052 -
Lele51g0650 349 Pfam Pyridoxal-phosphate dependent enzyme 44 319 IPR001926 -
Lele51g0650 349 CDD Thr-dehyd 32 339 - -
Lele51g0650 349 SUPERFAMILY Tryptophan synthase beta subunit-like PLP-dependent enzymes 32 343 IPR036052 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele51g0650 Lele-ChrLele51 3925851 3928019 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele51g0650 51 3925851 3928019 Lele51g0650 51 3925851 3928019 ECH
Lele49g0630 49 3818638 3820590 Lele51g0650 51 3925851 3928019 hybridization
Lele50g0658 50 4035623 4039150 Lele51g0650 51 3925851 3928019 hybridization