Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele51g0494 ATGGCATCCCAAATTCTTAATCAGGCGCTGTTTGCTTTGCCACAAAACCCCAATCAATGTTTTCCCCACAAGTTGGGTATTTCTACTATGTTGTCATGCTGCCCCTCTGCTCTTGGTTCTCGTAGTCGCCCTTTGTTTTCTAAAGTTACTTCGAGCTCAGTTTTATGGACTTGCAGTCCTCTCGTTGCTCAACCAATTAAGTCTACGTTTGTCGTGAGAGCTGAGGCGAATTCCGAAAGCGGAGGTGAAACTAGCGATAATGTTGAAGAGACCGAGTCGGCTAGTGTTGAAGAAGGTCAGGAAGCTGAAGCGGAAGAAGTGTCGGACCCTGATCCTAAACTAGATGAACCCAAGCCTCCCAGAAAACCGCGAGTTAAGCTTGGAGACATTATGGGGATATTGAATCAGAGAGCAATTGAGGTATCCGATAAGGAGAGGCCAACTCCGGACCTAAGGACTGGTGATATTGTGGAAATTAAATTGGAGGTTCCTGAAAACAGGCGTAGGTTGTCTGTTTATAAAGGTATTGTTATATCAAAACAAAATGCTGGTATTCACACAACAATTCGAATCCGAAGAATTATTGCCGGTGTGGGGGTTGAGATAGTCTTCCCAGTGTACTCACCAAATATCAAAGAACTCAAAGTAGTAAGCCACCGAAAGGTGAGGAGGGCCAGGTTGTATTATCTGAGAGACAAGCTTCCCAGATTGTCCACTTTCAAGTGA 726 0.4477 MASQILNQALFALPQNPNQCFPHKLGISTMLSCCPSALGSRSRPLFSKVTSSSVLWTCSPLVAQPIKSTFVVRAEANSESGGETSDNVEETESASVEEGQEAEAEEVSDPDPKLDEPKPPRKPRVKLGDIMGILNQRAIEVSDKERPTPDLRTGDIVEIKLEVPENRRRLSVYKGIVISKQNAGIHTTIRIRRIIAGVGVEIVFPVYSPNIKELKVVSHRKVRRARLYYLRDKLPRLSTFK 241
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele51g0494 241 PRINTS Ribosomal protein L19 signature 194 217 IPR001857 GO:0003735|GO:0005840|GO:0006412
Lele51g0494 241 PRINTS Ribosomal protein L19 signature 135 164 IPR001857 GO:0003735|GO:0005840|GO:0006412
Lele51g0494 241 MobiDBLite consensus disorder prediction 111 125 - -
Lele51g0494 241 SUPERFAMILY Translation proteins SH3-like domain 132 241 IPR008991 -
Lele51g0494 241 MobiDBLite consensus disorder prediction 77 126 - -
Lele51g0494 241 FunFam 50S ribosomal protein L19, chloroplastic 128 240 - -
Lele51g0494 241 Gene3D - 125 240 IPR038657 -
Lele51g0494 241 PANTHER RIBOSOMAL PROTEIN L19 42 241 IPR001857 GO:0003735|GO:0005840|GO:0006412
Lele51g0494 241 TIGRFAM rplS_bact: ribosomal protein bL19 142 233 IPR001857 GO:0003735|GO:0005840|GO:0006412
Lele51g0494 241 MobiDBLite consensus disorder prediction 90 110 - -
Lele51g0494 241 Pfam Ribosomal protein L19 140 235 IPR001857 GO:0003735|GO:0005840|GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele51g0494 Lele-ChrLele51 2908897 2911194 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele49g0478 49 2856834 2859332 Lele51g0494 51 2908897 2911194 hybridization
Lele50g0511 50 3049159 3051454 Lele51g0494 51 2908897 2911194 hybridization