Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele50g0511 ATGGCGTCCCAAATTCTTAATCAGGTGCTGTTTGCTTTGCCACAATACCCCAATCAATGTTTCCCCCACAAGTTGGGCATTTCTACTATGGTGTCATGCTGCCTCTCTGCGCCTGGTTCTCGTAGTCTCCCTTTGCTTTCTAAAGTTACTTCGAGCTCAATTTTATGGACTTGCAGTCCTCTCGTTGCTCAACCAATTGATTCTACATTTATCGTGAGAGCTGAGGCGAATTCCGAAACCGGAGGTGAAGCTAGCGATAATGTTGAAGAGACGGAGTTGGCTAGTGTTGAAGAAGCTCAGGAAGCTGAAGCGGAAGAAGTGTCGGACTGTGATTCTAAAGTGGATGAACACAAGCCTCCCAGAAAGCCGCGAGTTAAGCTCGGAGACATTATGGGGATATTGAATCAGAGAGCAATTGAGGCATCCGATAAGGAGAGGCCAACTCCGGACCTAAGGACTGGTGATATTGTCGAAATTAAATTGGAGGTTCCTGAAAACAGGCGTAGGTTGTCTGTTTATAAAGGCATTGTTATATCAAAACAAAATGCCGGTATTCACACTACAATTCGAATCCGAAGAATTATTGCTGGCGTGGGGGTTGAGATAGTCTTCCCAGTGTACTCACCAAATATCAAAGAACTCAAAGTAGTAAGCCACCGAAAGGTCAGGAGGGCCAGGTTGTACTATCTGAGAGACAAGCTTCCTAGACTGTCCACTTTCAAGTGA 726 0.4545 MASQILNQVLFALPQYPNQCFPHKLGISTMVSCCLSAPGSRSLPLLSKVTSSSILWTCSPLVAQPIDSTFIVRAEANSETGGEASDNVEETELASVEEAQEAEAEEVSDCDSKVDEHKPPRKPRVKLGDIMGILNQRAIEASDKERPTPDLRTGDIVEIKLEVPENRRRLSVYKGIVISKQNAGIHTTIRIRRIIAGVGVEIVFPVYSPNIKELKVVSHRKVRRARLYYLRDKLPRLSTFK 241
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele50g0511 241 MobiDBLite consensus disorder prediction 106 123 - -
Lele50g0511 241 TIGRFAM rplS_bact: ribosomal protein bL19 139 233 IPR001857 GO:0003735|GO:0005840|GO:0006412
Lele50g0511 241 PRINTS Ribosomal protein L19 signature 194 217 IPR001857 GO:0003735|GO:0005840|GO:0006412
Lele50g0511 241 PRINTS Ribosomal protein L19 signature 135 164 IPR001857 GO:0003735|GO:0005840|GO:0006412
Lele50g0511 241 SUPERFAMILY Translation proteins SH3-like domain 137 241 IPR008991 -
Lele50g0511 241 PANTHER RIBOSOMAL PROTEIN L19 36 241 IPR001857 GO:0003735|GO:0005840|GO:0006412
Lele50g0511 241 Gene3D - 124 240 IPR038657 -
Lele50g0511 241 MobiDBLite consensus disorder prediction 77 123 - -
Lele50g0511 241 MobiDBLite consensus disorder prediction 90 105 - -
Lele50g0511 241 FunFam 50S ribosomal protein L19, chloroplastic 128 240 - -
Lele50g0511 241 Pfam Ribosomal protein L19 138 235 IPR001857 GO:0003735|GO:0005840|GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele50g0511 Lele-ChrLele50 3049159 3051454 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele50g0511 50 3049159 3051454 Lele51g0494 51 2908897 2911194 hybridization
Lele50g0511 50 3049159 3051454 Lele52g0514 52 3125193 3127592 hybridization