Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele49g0478 ATGAGGAAACGGAGCGAAATCATTCGCGACAGCTGGGGCTCTCATGCCCTTCTTGCAGTGACCATTTTCCCCGCTTCTGCTAAACCCTCCCTAGTGTTCTTTTTGAACATGGCATCCCAAATTCTTAATCAGGCGCTGTTTGCTTTGCCACAAAACCCCAATCAATGTTTTCCCCACAAGTTGGGTATTTCTACTATGGTGTCATGCTTCCCCTCTGCTCTTGGTTCTCGCAGTCTCCCTTTGTTTTCTAAAGTTACTTCGAGCTCAGTTTTATGGACTTGCAGCCCTCTCGTTGCTCAACCAATTAAGTCTTCGTTTGTCTTGAGAGGTGACGCGAATTCCGAAAGCGGAGGTGAAACCAGCAATAATGTTGAAGAGACCGAGTCGGCTAGTGTTGAAGAAGTTCAGGAAGCTGAAGCGGAAGAAGTGTCGGACCCTGATCCTAAAGTAGATGAACCCAAGCCTCCCAGAAAACCGCGAGTTAAGCTTGGAGACATTATGGGGATATTGAATCAGAGAGCAATTGAGGCATCCGATAAGGAGAGGCCAACTCCGGACCTAAGGACTGGTGATATTGTGGAAATTAAATTGGAGGTTCCTGAAAACAGGCGTAGGTTGTCTGTTTATAAAGGTATTGTTATATCAAAACAAAATGCTGGTATTCACACAACAATTCGAATCCGAAGAATTATTGCCGGTGTGGGTGTTGAGATAGTCTTCCCAGTGTACTCCCCAAATATCAAAGAACTCAAAGTAGTAAGCCACCGAAAGGTGAGGAGGGCCAGGTTGTACTATCTGAGAGACAAGCTTCCCAGACTTTCCACTTTCAAGTGA 834 0.4568 MRKRSEIIRDSWGSHALLAVTIFPASAKPSLVFFLNMASQILNQALFALPQNPNQCFPHKLGISTMVSCFPSALGSRSLPLFSKVTSSSVLWTCSPLVAQPIKSSFVLRGDANSESGGETSNNVEETESASVEEVQEAEAEEVSDPDPKVDEPKPPRKPRVKLGDIMGILNQRAIEASDKERPTPDLRTGDIVEIKLEVPENRRRLSVYKGIVISKQNAGIHTTIRIRRIIAGVGVEIVFPVYSPNIKELKVVSHRKVRRARLYYLRDKLPRLSTFK 277
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele49g0478 277 MobiDBLite consensus disorder prediction 147 161 - -
Lele49g0478 277 MobiDBLite consensus disorder prediction 130 146 - -
Lele49g0478 277 PANTHER RIBOSOMAL PROTEIN L19 83 277 IPR001857 GO:0003735|GO:0005840|GO:0006412
Lele49g0478 277 PRINTS Ribosomal protein L19 signature 171 200 IPR001857 GO:0003735|GO:0005840|GO:0006412
Lele49g0478 277 PRINTS Ribosomal protein L19 signature 230 253 IPR001857 GO:0003735|GO:0005840|GO:0006412
Lele49g0478 277 SUPERFAMILY Translation proteins SH3-like domain 173 277 IPR008991 -
Lele49g0478 277 FunFam 50S ribosomal protein L19, chloroplastic 164 276 - -
Lele49g0478 277 MobiDBLite consensus disorder prediction 110 129 - -
Lele49g0478 277 Gene3D - 161 276 IPR038657 -
Lele49g0478 277 TIGRFAM rplS_bact: ribosomal protein bL19 175 269 IPR001857 GO:0003735|GO:0005840|GO:0006412
Lele49g0478 277 Pfam Ribosomal protein L19 174 271 IPR001857 GO:0003735|GO:0005840|GO:0006412
Lele49g0478 277 MobiDBLite consensus disorder prediction 110 163 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele49g0478 Lele-ChrLele49 2856834 2859332 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele49g0478 49 2856834 2859332 Lele51g0494 51 2908897 2911194 hybridization
Lele49g0478 49 2856834 2859332 Lele52g0514 52 3125193 3127592 hybridization