Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele51g0468 ATGTACAGAGAGCGAGGTGGTGTTGGGTCCAAGTCGGAGGTGGGTTCGGTGGGTTCAGTTGGTCGCAAGCGAACCAATGACGTCCTCGACAAGCAGCTCGAACGATCCCCGCCGTCCACTTCCAGGGAAATCAAGGCGAAGGACAGTTCGGCGAAATCCATCTTGGCTGCTAAACTACCCTATGATCACATGGACTCATACTCTGCTTCCGATGGACCTGACCTCTTTTCCGTTGTATTAATAGCAGAAGATGATAGAAAATCTTGCATTTTACCTTCTTCTTTTTTCTTCATTTTGTATTTTCTACCCTCCGTTTTCTCCTTCAGACAGCATCATGTTTTGTACCATTTCGAGAATATCGAACTTATGTACGTTGGGGGTTTTACCTTCGTCTTATCTAATTGGACATATGAAGGGCATATCAAAGAAAGCCAAGAGAGGTATCTGAAACAGACAATGACGAATCAGAAGGTTATGGTTATGATGGGGATGATCTATAAGTTTTGTACTCTAAGAGGAAACGAATTCTTTTGTGAAGTTGATGATAATTACATACAAGATGATTTCAACCTCTATGGATTAAGCAGTCAAGTCTCTCACTATGACTGTGCCCTTGATTTAATTCTGGATGTTGAATCCTCGCATGGTGACATGTTCACAGAGGAGCTAAATGAATTAACTGAATCAGATGCAAAGATGCTTTATGGTCTGATACATGCTCGATATGTTCTGACAAATAAAGGAATGGATGCTATGTTGCACAAGTATAAAAAGTATCACTTTGGCAGGTGTCCAAGAGCTTACTGCTCTAGACAATCCTGCCTTCCCGTTGGTCAGTCAGACATTCCTAGGTCAAGTACTGTGAAGATATACTGCCCTAGCTGTGAAGACATCTACTACCCCCGACACCAGAACCATGGCGGAGATATGTTCCAAGAGTTTTTGGTTTCAAAGTTCACAAGCCTTCACCATAAGAAGAGTCTGTACATGTCAAACTTAACTCACTCTGCCGTGTCCCAATTGAGTCTGTACGCAAGTTGGATTGCATCTTTATTTCATATTCTCGGTGTTCCTCAGTTTTGTAGAGAGATAAGCAGCAGCATGCTCTTAACGTTGTTTGAAGATTCAAATCCAGTCAGCGTTCACCCATAGTTCCAAAGGTTCTCAAGAGCCTGCCCCTCTGTGTGTGTGTGTGGTTCGCCCATAAATTTTCGTCTGAGCAGGCGAAAGCTAAAACAAAGGGAAGAGAAAGGATGGAAATGGACTAGCTTCTCCTGGAACCTGCAAGTGCGTCTAGAACCCTAG 1305 0.4322 MYRERGGVGSKSEVGSVGSVGRKRTNDVLDKQLERSPPSTSREIKAKDSSAKSILAAKLPYDHMDSYSASDGPDLFSVVLIAEDDRKSCILPSSFFFILYFLPSVFSFRQHHVLYHFENIELMYVGGFTFVLSNWTYEGHIKESQERYLKQTMTNQKVMVMMGMIYKFCTLRGNEFFCEVDDNYIQDDFNLYGLSSQVSHYDCALDLILDVESSHGDMFTEELNELTESDAKMLYGLIHARYVLTNKGMDAMLHKYKKYHFGRCPRAYCSRQSCLPVGQSDIPRSSTVKIYCPSCEDIYYPRHQNHGGDMFQEFLVSKFTSLHHKKSLYMSNLTHSAVSQLSLYASWIASLFHILGVPQFCREISSSMLLTLFEDSNPVSVHPXFQRFSRACPSVCVCGSPINFRLSRRKLKQREEKGWKWTSFSWNLQVRLEP 434
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele51g0468 434 FunFam Casein kinase II subunit beta 261 327 - -
Lele51g0468 434 Gene3D - 261 327 - -
Lele51g0468 434 MobiDBLite consensus disorder prediction 1 46 - -
Lele51g0468 434 SMART CK_II_beta_2 163 325 IPR000704 GO:0005956|GO:0019887
Lele51g0468 434 FunFam Casein kinase II subunit beta 156 260 - -
Lele51g0468 434 PRINTS Casein kinase II regulatory subunit family signature 282 303 IPR000704 GO:0005956|GO:0019887
Lele51g0468 434 PRINTS Casein kinase II regulatory subunit family signature 260 281 IPR000704 GO:0005956|GO:0019887
Lele51g0468 434 PRINTS Casein kinase II regulatory subunit family signature 235 256 IPR000704 GO:0005956|GO:0019887
Lele51g0468 434 PRINTS Casein kinase II regulatory subunit family signature 163 179 IPR000704 GO:0005956|GO:0019887
Lele51g0468 434 PRINTS Casein kinase II regulatory subunit family signature 180 194 IPR000704 GO:0005956|GO:0019887
Lele51g0468 434 ProSitePatterns Casein kinase II regulatory subunit signature. 264 295 IPR000704 GO:0005956|GO:0019887
Lele51g0468 434 Pfam Casein kinase II regulatory subunit 165 324 IPR000704 GO:0005956|GO:0019887
Lele51g0468 434 PANTHER CASEIN KINASE II SUBUNIT BETA 144 325 IPR000704 GO:0005956|GO:0019887
Lele51g0468 434 SUPERFAMILY Casein kinase II beta subunit 165 326 IPR035991 GO:0005956|GO:0019887
Lele51g0468 434 Gene3D protein kinase ck2 holoenzyme, chain C, domain 1 161 260 IPR016149 GO:0005956|GO:0019887
Lele51g0468 434 MobiDBLite consensus disorder prediction 24 46 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele51g0468 Lele-ChrLele51 2756513 2759805 Dispersed/Tandem
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele51g0468 51 2756513 2759805 Lele51g0468 51 2756513 2759805 ECH
Lele49g0451 49 2703182 2708721 Lele51g0468 51 2756513 2759805 hybridization
Lele50g0488 50 2885666 2888002 Lele51g0468 51 2756513 2759805 hybridization