Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele50g0488 ATGTACAGAGAGCGAGGTGGTATTGGGTCCAAGTCCGAGGTGGCTTTGGTTGATCGCAAGCGAATCAATGACGTCCTCGACAAGCAGCTCGAGCGATCATCGCCGTCCACTTCCAGAGCAATCAAGGTGAAGGACAGTTCGGCGCAATCCATCTTGGCTGCTAAACTACCCCATGATCACAGGGACTCTCACTCGGCCTCTGTCTTCAAGAATTCCGATGCCTTTGATGGTGACGTGTTCACAGAGGAACAAAATGAATTAATTGAATCAGCTGCAGAGATGCTTTATGGTCTGATACATGCTCGATATGTTTTGAAAAATAAAGGAATGGATGCTATGATGCAAAGTATAAAAACTATGACTTTGGCAGTTGTCCAAGAGTTTACTGCTCTCGACAACCCTGCCTTCCCGTTGGTCAGTCAGACATTCCTAGGTCAAGTACCGTCAAGATATACTGCCCTAGCTGTGAAGATATCTACTACCCCCGGTCTAAGTATCAAGGCACATTGGAAACTTGTGATGAACCGCTTATATGCATGCGGTTCTATATTGTGTGCACAAAATGCTGAGATCTTTTTTATTCCCACTTCTAGTATAGTTTATAAAGTTCTCAAGAGGCTGGGTCTCTGTGATTTGCCCACAATTTTCTGTCTGAGCAGGCGGAAGCCTAAACAAAGGGAAGAGAAAGGATAG 693 0.4517 MYRERGGIGSKSEVALVDRKRINDVLDKQLERSSPSTSRAIKVKDSSAQSILAAKLPHDHRDSHSASVFKNSDAFDGDVFTEEQNELIESAAEMLYGLIHARYVLKNKGMDAMMQSIKTMTLAVVQEFTALDNPAFPLVSQTFLGQVPSRYTALAVKISTTPGLSIKAHWKLVMNRLYACGSILCAQNAEIFFIPTSSIVYKVLKRLGLCDLPTIFCLSRRKPKQREEKG 230
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele50g0488 230 SUPERFAMILY Casein kinase II beta subunit 68 118 IPR035991 GO:0005956|GO:0019887
Lele50g0488 230 Gene3D protein kinase ck2 holoenzyme, chain C, domain 1 17 117 IPR016149 GO:0005956|GO:0019887
Lele50g0488 230 Pfam Casein kinase II regulatory subunit 76 130 IPR000704 GO:0005956|GO:0019887
Lele50g0488 230 PANTHER CASEIN KINASE II SUBUNIT BETA 76 138 IPR000704 GO:0005956|GO:0019887
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele50g0488 Lele-ChrLele50 2885666 2888002 Tandem
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele50g0488 50 2885666 2888002 Lele50g0488 50 2885666 2888002 ECH
Lele50g0488 50 2885666 2888002 Lele51g0468 51 2756513 2759805 hybridization
Lele50g0488 50 2885666 2888002 Lele52g0486 52 2954731 2957455 hybridization