Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele51g0458 ATGGCCGTCCAAGCTCAATACCCATCCAATATTCTCCTCCTCAACAGAAATGAACAGGAAGGGCATGATTATTCGTTTCAGCCACAACCAGGAGGGCTTCTTGATCAGTCCCCTGTCTTATTCAACAATGGAGGTACTAATTCTCGCAAGAGAGGAAGAGAAGCAACGGCCGCCACCTGCGTCACCCAAACAGCTCCTAACGGTGTTAATCCCTTCTCTTTGCAATCCCAGCCTCCTCGGCTCGTAGAACTCTCTCAACTCCATAACCAACAACCAAATGTGGTCTCCACAGGCCTCCGATTATCCTTCGGCGACCATCAACAGCAACGACAACAGAGACTACAATTCCAGCAACAACGCCAACAACATCAACAAGCCTGTCAGCCGTATGCTTTCTTATCTCTATTACCGGAAGGATTTGCATCCCAAATCAAACAACAGCGTGATGAGATTGATCAATTTCTTCAGGCCCAGGGAGAACAATTGCGACGAGCACTAGCCGAGAAGAGGCAGGGGCATTATCGTGAACTTCTAAGCGCGGCGGAAGAATCGGTGGCCCGGCGGTTGAGAGAAAAGGAGGCTGAGATGGAGAAGGCAACGCGCAGGAATGCCGAGTTAGAAGCGCGCGCGGCGCAACTTAGCTTGGAGGCGCAGGTTTGGCAGTCAAATGCAAAGGCACAAGAGGCAACGGCGGCGTCCCTGCAAGCGCAACTCCAACAAGCTATGATGAGCGGGGGTGCGCAGGATAAAGGGGGAGGGTGTTTCGCGGAGGACGGAGGGCTATCATGCGCGGTGGGTGGGGGAGAGGGCCAACCGGAGGACGCCGAGTCAGCGTATATTGACCCGGACCGAGTGGTGGCATCGGGACCCAAATGCAGAGGCTGTGGGAAGCGAGTGGCATCGGTGGTGGCCTTGCCGTGTCGGCACTTATGCATCTGCACGGAATGCGACGCGCATTTCCAAGCGTGTCCCGTTTGCCTCACGCTCATAAATTCAACCGTCGAAGTCTTCCTCTATTAG 1020 0.5422 MAVQAQYPSNILLLNRNEQEGHDYSFQPQPGGLLDQSPVLFNNGGTNSRKRGREATAATCVTQTAPNGVNPFSLQSQPPRLVELSQLHNQQPNVVSTGLRLSFGDHQQQRQQRLQFQQQRQQHQQACQPYAFLSLLPEGFASQIKQQRDEIDQFLQAQGEQLRRALAEKRQGHYRELLSAAEESVARRLREKEAEMEKATRRNAELEARAAQLSLEAQVWQSNAKAQEATAASLQAQLQQAMMSGGAQDKGGGCFAEDGGLSCAVGGGEGQPEDAESAYIDPDRVVASGPKCRGCGKRVASVVALPCRHLCICTECDAHFQACPVCLTLINSTVEVFLY 339
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele51g0458 339 Coils Coil 106 126 - -
Lele51g0458 339 MobiDBLite consensus disorder prediction 21 53 - -
Lele51g0458 339 FunFam probable BOI-related E3 ubiquitin-protein ligase 2 274 338 - -
Lele51g0458 339 ProSiteProfiles Zinc finger RING-type profile. 292 326 IPR001841 -
Lele51g0458 339 PIRSF SBP1_RNase_bind 1 339 IPR017066 -
Lele51g0458 339 Coils Coil 182 244 - -
Lele51g0458 339 Pfam Zinc finger, C3HC4 type (RING finger) 291 332 - -
Lele51g0458 339 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 273 339 IPR013083 -
Lele51g0458 339 PANTHER SBP (S-RIBONUCLEASE BINDING PROTEIN) FAMILY PROTEIN 42 336 IPR017066 -
Lele51g0458 339 MobiDBLite consensus disorder prediction 39 53 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele51g0458 Lele-ChrLele51 2684912 2686247 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele51g0458 292 337 Miscellaneous Gene Families AT2G21380 34.783 6.49e-06 46.2
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele51g0458 51 2684912 2686247 Lele51g0458 51 2684912 2686247 ECH
Lele49g0442 49 2638756 2640089 Lele51g0458 51 2684912 2686247 hybridization
Lele50g0478 50 2819154 2820985 Lele51g0458 51 2684912 2686247 hybridization