Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele50g0478 ATGGCGGTTCAAGCTCAATACCCATCCAATATTCTCCTCCTCAACAGAAACGAACAGGAAGGGCATGATTATTCGTTACCGCCACAGCCAGGAGGGCTTCTTGATCAGTCCCATGTCTTATTCAACAATGGAGGTACTAATAATTCTCGCAAGAGAGGAAGAGAAGCAACGGCGGCCACCTTCTCTATGCAATCCCAGCCTCCTCAGCTCGTAGAACTCTCTCAACTCCATAACCGGCAACCAAATGTGGTCTCCACGGGCCTGCGATTATCATTCGGCGACCATCAACAGCAACGACAACAAAGAATACAATTACAGCAACAACAACAACAACAACAACGACAAGCCCATCAGCCTTATGCTTTCTTATCTCTATTATCGGAAGGATTTGGCTCCCAAATCAAACAACAGCGTGATGAGATTGATCAATTTCTTCAGGCCCAGGGGGAACAATTGCGACGAGAATTATCCGAGAAGAGGCAGAGGCATTATCGTGCCCTTCTAAGCGCGGCGGAAGAATCGGTGGTCCGGCGGTTGAGAGAGAAAGAAGTTGAGATGGAAAAGACAACGCGCAGGAATGCCGAGTTAGAAGCGCGCGCTGCACAACTTAGCGTGGAGGCGCAGGCTTGGCAGGCAAAGGCAAAGGCACAAGAGGCAACGGCGGCGTCGCTGCAAGCGCAACTGCAACAGGCTATGATGAGCGGGGGTGCGCAGGATAAAGTAAGAGGGTGTTTCGCAGAGGACGGGGGGCCATCTTGCGCGGTGGGTGGTGGGGAGGGGCAACCGGAGGACGCCGAGTCGGCGTATATTGACCCGGATCGAGTGGTGGCATCGGGACCCAAATGCAGAGGCTGTGGGAAGCGAGTGGCATCGGTGGTGGAATCTCAAGTCACAAGCAATGCCTATTGCCATACATTTCCTTGCCCTTTTTTGTCTTTTGGAAACGAAATATCATAA 957 0.5183 MAVQAQYPSNILLLNRNEQEGHDYSLPPQPGGLLDQSHVLFNNGGTNNSRKRGREATAATFSMQSQPPQLVELSQLHNRQPNVVSTGLRLSFGDHQQQRQQRIQLQQQQQQQQRQAHQPYAFLSLLSEGFGSQIKQQRDEIDQFLQAQGEQLRRELSEKRQRHYRALLSAAEESVVRRLREKEVEMEKTTRRNAELEARAAQLSVEAQAWQAKAKAQEATAASLQAQLQQAMMSGGAQDKVRGCFAEDGGPSCAVGGGEGQPEDAESAYIDPDRVVASGPKCRGCGKRVASVVESQVTSNAYCHTFPCPFLSFGNEIS 318
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele50g0478 318 MobiDBLite consensus disorder prediction 20 57 - -
Lele50g0478 318 MobiDBLite consensus disorder prediction 39 57 - -
Lele50g0478 318 PANTHER SBP (S-RIBONUCLEASE BINDING PROTEIN) FAMILY PROTEIN 43 293 IPR017066 -
Lele50g0478 318 Coils Coil 95 115 - -
Lele50g0478 318 PIRSF SBP1_RNase_bind 1 294 IPR017066 -
Lele50g0478 318 Coils Coil 179 234 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele50g0478 Lele-ChrLele50 2819154 2820985 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele50g0478 50 2819154 2820985 Lele50g0478 50 2819154 2820985 ECH
Lele50g0478 50 2819154 2820985 Lele51g0458 51 2684912 2686247 hybridization
Lele50g0478 50 2819154 2820985 Lele52g0473 52 2889278 2890561 hybridization