Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele51g0217 ATGGCGCCCTCTTACTGTGTGAGGGAGAGAAAGTCATGCGTGCCCTGGGTTCAGAAGTACTTCAAGGACTCCCTCTGTAATCTCAAAGACGACTTCTCCTTCTCTTTCGGGCTCATCAGTCTCGTATGCTGGGGTGTCGCAGAAATTCCTCAGATAATCACCAACTTTCACACCAAGTCCAGCCATGGAGTTTCACTCGCCTTTCTCCTAACATGGGTCGCTGGAGATATATTCAATCTGGTGGGTTGTCTTCTGGAGCCAGCCACGCTGCCCACTCAATTATATACAGCTCTGCTGTATACAACAACTACAATTGTATTAGTGCTGCAAAGCTTGTACTATGATTACATCTACAAATGGTGCAGACGAAGTCGCCAAAAAATCAATAACCAAGAGGACGAAGAAGAGAAAAAACCGTTGAGACCGAAACCAAGACACGAGTCTGGAGTGCCCATACCAAATGGCGCACACAAAACATCCCCGGCCCCTCGAAGAGAGATGTTCTATTATACGTCAGCCAGGTCTCTGGCTGGGAGTGGCACACCACCGTTTCGCAACTACATGCGAGCAGCCAAGAGTGGCCCTTCCGCCCTGGAATTGAACTCTGACTCCTCCGACGATGAGGCTCCGCCGTCTTACTCCGTCAACTCTCCTTCCCAACCTCGACCAATCCCTCGTTCTTACGCCGGAGGTTATGGAACATTCTTAGCAGCATCGGCTAACTTGCCTGCGCAAGGCCATGCTTTAGCATTCACTGCAAGGAAACTCTTACAGGAGCAAGAGGCGCACAGTGCTTTTGGTCAATGGTTGGGATGGCTCATGGCTGCTATATACATGGGAGGCCGACTCCCTCAGATATGGCTGAATATTAAAAGAGGGAGTGTAGAGGGCTTGAACCCCTTCATGTTCGTCTTTGCTTTGATTGCCAATGTTACCTACGTGGCGAGTATTCTGGTACGAACTATTGAATGGGAGAGCATCAAGGCAAATATGCCATGGTTGTTGGATGCTGTAGTCTGCGTGGCTCTGGACCTATTTATAATAGTGCAGTACATATATTACAGGTACATCCGAAGGAGATGGCGAAGGGATGAGAATGGAGGAGACTACCAAAGAAGCAAGTAA 1125 0.4889 MAPSYCVRERKSCVPWVQKYFKDSLCNLKDDFSFSFGLISLVCWGVAEIPQIITNFHTKSSHGVSLAFLLTWVAGDIFNLVGCLLEPATLPTQLYTALLYTTTTIVLVLQSLYYDYIYKWCRRSRQKINNQEDEEEKKPLRPKPRHESGVPIPNGAHKTSPAPRREMFYYTSARSLAGSGTPPFRNYMRAAKSGPSALELNSDSSDDEAPPSYSVNSPSQPRPIPRSYAGGYGTFLAASANLPAQGHALAFTARKLLQEQEAHSAFGQWLGWLMAAIYMGGRLPQIWLNIKRGSVEGLNPFMFVFALIANVTYVASILVRTIEWESIKANMPWLLDAVVCVALDLFIIVQYIYYRYIRRRWRRDENGGDYQRSK 374
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele51g0217 374 MobiDBLite consensus disorder prediction 129 164 - -
Lele51g0217 374 FunFam PQ-loop repeat family protein / transmembrane family protein 32 128 - -
Lele51g0217 374 SMART ctns 280 311 IPR006603 -
Lele51g0217 374 SMART ctns 46 77 IPR006603 -
Lele51g0217 374 MobiDBLite consensus disorder prediction 197 222 - -
Lele51g0217 374 Pfam PQ loop repeat 267 322 IPR006603 -
Lele51g0217 374 Pfam PQ loop repeat 32 88 IPR006603 -
Lele51g0217 374 FunFam Vacuolar membrane PQ loop repeat protein 266 364 - -
Lele51g0217 374 Gene3D - 35 135 - -
Lele51g0217 374 Gene3D - 267 366 - -
Lele51g0217 374 MobiDBLite consensus disorder prediction 129 145 - -
Lele51g0217 374 PANTHER SEVEN TRANSMEMBRANE PROTEIN 1-RELATED 5 358 - -
Lele51g0217 374 MobiDBLite consensus disorder prediction 195 222 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele51g0217 Lele-ChrLele51 1208906 1212104 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele49g0200 49 1185972 1193698 Lele51g0217 51 1208906 1212104 hybridization
Lele50g0214 50 1263495 1266521 Lele51g0217 51 1208906 1212104 hybridization