Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele51g0190 ATGAAGTGCCCGTACTGTGCGGCGACTCAAGGTCGTAGCGCCACCACCAGCTCCGCTCGCTCCATAACGGAGTGCATATCCTGCGGCCGAGTTGTTGAAGAGCGACAGTCCCACCCTCACCATCTCTTCCACCTCCGCGCACAAGACAATCCTCTCTGTCTCGTCACTCCCGACCTCCCCTCCCTCCAACCCTTTCATCAAAGCCAAGACGACGATGACCCCTTCGAGCCCACCGGCTTCATCACTGCATTTTCCACTTGGTCCCTTGAGTCCAGCCCTCTCTACCTCCAGTCCTGTCTTTCATTCTCTGGTCACCTCGCCGAGCTTGAGAGGGCTCTCGAATCGTCCTCGTCTTCATCCTCCTCTTCGACACCATCGTCTTCAACTTCGTCGACGGTTGTGGTTGATAATTTGAGGGCGTACATGCAGATTATTGATGTCGCGTCGATACTTGGGCTGGACTACGATATCTCAGACCATGCGTTTCAATTATTCAGGGATTGTTGTTCGGCTACTTGTTTGAGAAACCGGAGCGTCGAAGCGCTTGCCACTGCTGCTCTTGTTCAGGCAATTAGAGAGGCTCAGGAACCCAGAACCCTTCAGGAAATTTCAATTGCGGCCAATGTGCCACAAAAGGAGATTGGGAAATACATCAAGATACTAGGAGAGGCTTTGCAGCTCAGTCAGCCCATTAATAGCAATTCTATTTCAGTCCATATGCCTAGATTTTGTACCCTTCTACAACTCAATAAATCTGCTCAGGAACTGGCCACTCACATAGGAGAGGTTGTGATCAACAAATGCTTCTGCACCCGCAGGAATCCTATTAGCATTTCGGCTGCTGCTATATACCTGGCTTGCCAACTGGAAGACAAACGCAAAACCCAGGCAGAAATCTGCAAGGTGACTGGTCTTACTGAAGTAACTCTTCGTAAAGTGTACAAGGAACTTCTAGAGAATTGGGATGATTTGCTTCCCTCTAATTATACACCAGCTGTTCCTCCTGAGAGGGCCTTCCCTACTACTGTAATTGCTTCAGGTCGTTCATCAACAACTAAGGTTGAGGCAATAGAGGTTAATTCTTCTTTAGACAGAGACAAGCTACTAGAAATCAAACCTAGCAAACCAAATGAGGTTTCAGTCATGGTACATCAGCTCAGGGGGAAAGATGATGTTGAAAGTAAGAGCAATGCTAGCGTGACCCACTCGGCACTGAATCAGCAGTCAGCTTTCTGGCAATCCCAGCTTCCTATTGGAGCGTGTAATCATAAAACGACAGGAGAAAAAAGTCGAAATGTCTTGCAAGGAATGGACGTAGAGGGACTGCAGCATAGCCACCTACAGCCTGAACAGAAGTCTGAAGACACAAATGGTAATATTAATCCTTTTCAAAAACCCAACCATCTTAGCAGTCCTTCTGCGTCGTCTGCTAGCCCTATTATGAAGCCCTTTTCGGCTACGCCTCCAAATGTTTGA 1476 0.4831 MKCPYCAATQGRSATTSSARSITECISCGRVVEERQSHPHHLFHLRAQDNPLCLVTPDLPSLQPFHQSQDDDDPFEPTGFITAFSTWSLESSPLYLQSCLSFSGHLAELERALESSSSSSSSSTPSSSTSSTVVVDNLRAYMQIIDVASILGLDYDISDHAFQLFRDCCSATCLRNRSVEALATAALVQAIREAQEPRTLQEISIAANVPQKEIGKYIKILGEALQLSQPINSNSISVHMPRFCTLLQLNKSAQELATHIGEVVINKCFCTRRNPISISAAAIYLACQLEDKRKTQAEICKVTGLTEVTLRKVYKELLENWDDLLPSNYTPAVPPERAFPTTVIASGRSSTTKVEAIEVNSSLDRDKLLEIKPSKPNEVSVMVHQLRGKDDVESKSNASVTHSALNQQSAFWQSQLPIGACNHKTTGEKSRNVLQGMDVEGLQHSHLQPEQKSEDTNGNINPFQKPNHLSSPSASSASPIMKPFSATPPNV 491
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele51g0190 491 Gene3D - 138 229 - -
Lele51g0190 491 SUPERFAMILY Cyclin-like 139 229 IPR036915 -
Lele51g0190 491 PANTHER TRANSCRIPTION INITIATION FACTOR IIB-RELATED 1 358 IPR000812 GO:0006352|GO:0070897
Lele51g0190 491 SUPERFAMILY Cyclin-like 236 334 IPR036915 -
Lele51g0190 491 FunFam Transcription initiation factor IIB 238 335 - -
Lele51g0190 491 Gene3D - 238 334 - -
Lele51g0190 491 FunFam Transcription initiation factor TFIIB 138 229 - -
Lele51g0190 491 CDD CYCLIN 240 318 IPR013763 -
Lele51g0190 491 Pfam Transcription factor TFIIB repeat 238 319 IPR013150 GO:0017025
Lele51g0190 491 Pfam Transcription factor TFIIB repeat 140 221 IPR013150 GO:0017025
Lele51g0190 491 CDD CYCLIN 140 221 IPR013763 -
Lele51g0190 491 SMART cyclin_7 238 319 IPR013763 -
Lele51g0190 491 SMART cyclin_7 142 223 IPR013763 -
Lele51g0190 491 PRINTS Transcription initiation factor IIB signature 18 38 IPR000812 GO:0006352|GO:0070897
Lele51g0190 491 PRINTS Transcription initiation factor IIB signature 210 225 IPR000812 GO:0006352|GO:0070897
Lele51g0190 491 PRINTS Transcription initiation factor IIB signature 239 257 IPR000812 GO:0006352|GO:0070897
Lele51g0190 491 PRINTS Transcription initiation factor IIB signature 273 289 IPR000812 GO:0006352|GO:0070897
Lele51g0190 491 PRINTS Transcription initiation factor IIB signature 305 319 IPR000812 GO:0006352|GO:0070897
Lele51g0190 491 PRINTS Transcription initiation factor IIB signature 184 203 IPR000812 GO:0006352|GO:0070897
Lele51g0190 491 MobiDBLite consensus disorder prediction 452 485 - -
Lele51g0190 491 MobiDBLite consensus disorder prediction 445 491 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele51g0190 Lele-ChrLele51 1080432 1084016 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele49g0173 49 1054869 1058427 Lele51g0190 51 1080432 1084016 hybridization
Lele50g0192 50 1129360 1133622 Lele51g0190 51 1080432 1084016 hybridization