Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele50g0192 ATGATTATCGGAGAGGCATTCGAGGCCGCCTATGAAGCGCTAACTAGTGATGCGCCTGGGGTCAGAGAGGCCGCCATCGCGGAGATCGCCAAGATTGTGCGCCCCATTGATTTCGACCCCCCTCCCATCCAATCAACGGTTGGTACTTTTCGTAATCTTCATCTTGATCTCTTTTGCGGGCCTCTTTTTAAGTTTAGTTACTGGATTGTTTGCAGATGTCGTATGGTCTTAGAGGCAATTGAAATGCTTAACACAAACAACAGTTCTGCATCGCTTCATTTTGCTGATGTTATGTTACCATGGTCTAGTTCCGTAGGAATCCCAAGCATTTCTGCTGCTGCTATATACCTGGCTTGCCAACTCGAAGACAAACGCAAAACCCAGGCAGAAATCTGCAAGGTGACTGGTCTTACTGAAGTAACTCTTCGTAAAGTGTACAAGGAACTTCTAGAGAATTGGGATGATTTGCTTCCCTCTAATTATACACCAGCTGTTCCTCCGGAGAGGGCATTCCCTACTACTGTAATTGCTCCAGGTCGTTCATCAGCAACTAAGGTTGATGCAATAGAGGTTAATTCTCCTTTAGACAGAGATAAGCTAATAGAAATCAAACCTAGCAAACCAAATGAGGTTCCAGTCATGGTACATCAGCTCAGGGGGAAAGATGATGTTGAAAGTAAGAGCAATGCTAGCGTGACTCACTCGGCACTGAATCAGCAGTCAGCTTTCTGGCAATCCCAACTTCCTATTGGGGCATGTAATCATAAAAGGACAGGAGAAAAAAGTCGAAATGTCTTGCAAGGAATGGACGTAGAGGGACTGCAGCATAACCGCCTACAGCCTGAACAGAAGTCTGAAGACACAAATGGTATTAGTATTAATCCTTTTCAAAAACCCAACCGTCTTAGCAGTCCTTCTACTTCGTCTGCTAGCCCTGTTATGAGGCCCTTTTCCGCTCCTCCTTCACCTGCGCCTCCAAATGTTTGA 987 0.4559 MIIGEAFEAAYEALTSDAPGVREAAIAEIAKIVRPIDFDPPPIQSTVGTFRNLHLDLFCGPLFKFSYWIVCRCRMVLEAIEMLNTNNSSASLHFADVMLPWSSSVGIPSISAAAIYLACQLEDKRKTQAEICKVTGLTEVTLRKVYKELLENWDDLLPSNYTPAVPPERAFPTTVIAPGRSSATKVDAIEVNSPLDRDKLIEIKPSKPNEVPVMVHQLRGKDDVESKSNASVTHSALNQQSAFWQSQLPIGACNHKRTGEKSRNVLQGMDVEGLQHNRLQPEQKSEDTNGISINPFQKPNRLSSPSTSSASPVMRPFSAPPSPAPPNV 328
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele50g0192 328 Pfam Protein of unknown function (DUF1195) 5 41 IPR010608 -
Lele50g0192 328 MobiDBLite consensus disorder prediction 276 328 - -
Lele50g0192 328 FunFam Transcription initiation factor IIB 93 167 - -
Lele50g0192 328 MobiDBLite consensus disorder prediction 284 315 - -
Lele50g0192 328 CDD CYCLIN 97 150 IPR013763 -
Lele50g0192 328 Gene3D - 101 167 - -
Lele50g0192 328 Pfam Transcription factor TFIIB repeat 109 151 IPR013150 GO:0017025
Lele50g0192 328 PANTHER TRANSCRIPTION INITIATION FACTOR IIB-RELATED 109 220 IPR000812 GO:0006352|GO:0070897
Lele50g0192 328 SUPERFAMILY Cyclin-like 107 166 IPR036915 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele50g0192 Lele-ChrLele50 1129360 1133622 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele50g0192 50 1129360 1133622 Lele51g0190 51 1080432 1084016 hybridization
Lele50g0192 50 1129360 1133622 Lele52g0192 52 1135972 1140302 hybridization