Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele51g0164 ATGACTGCTGCAAGATTATCATCGTGCGTAGCCATGGCTGCGGCCTTGGCTGCCGCGTCCGCTCTCTCTAATAAGGCTTACGCTGAGTCCTCCTTTCGTTTCCCTCTTTTCTCTCCTTCGTCGTCTACTCCAGCTCCTCAGGTGGATCAGAATTCTGATACTAAGTCAGAATCTCAAGCTGCCGATGAACCCAGTAAGTCAGGTTTTGATCCGGAATCGTTAGAACGAGGGGCGAAAGCTCTCCGCGAAATCAATTCTTCTCGGTATTCTAAACAGGTTTTTGATTTGATGAGAAAGCAGGAACAAACTCGCCTTGCTGAGTTAGATGCCGAGAAAGTTCATTATGAGCTAATTCAGTCTCAAGTTGATATTGATAGGCAGCGGAAATTAGCTGAAGAACAACGGAATCTTATACAGGAGCAGGCTCAGAGGCAGGCCCAGGTGATGCGATATGAGGATGAACTGGCTAGGAAAAGAATGCAGGCAGATCATGAAGCTCAGAGACGACATAATGCTGAATTGGTGAAGATGCAAGAGGAGTCCTCTGTTAGAAAGGAACAGGCAAGGCGAGCTACTGAAGAACAGATTCAAGCTCAGCAGCGTCAAACTGAGAGAGAGAGAGCTGAAATAGAAAGGGAAACCATAAGAGTTGGGGCCATGGCGGAGGCAGAGGGTCGAGCCCATGAAGCGAAACTAACTGAGGAGCATAATAGTAGAATGCTTAGAGACCGGATGCAGGGTGAAAAAGAAAAATGGCTTGCTGCAATTAACACGACTTTTAGTCATATTGAAGGTGGCTTAAGGGTCTTATTGACTGATAGGGACAAATTGCTTATGACTGTGGGAGGGGCCACAGCATTAGCTGCAGGAGTATATACGACTAGAGAAGGTGCCAAAGTGACATGGGGCTACATTAATCGCATTTTGGGTCAGCCATCATTGATCCGGGAATCATCCATTGCAAAATTTCCGGGGTCAAGGATCATATCTCAAGCCAAAAATAAAGCTTTAAGTTATAGTACTATGGCCAAGGCAGAAAAAATTTCAGAGAGTAAAACTGGCCTTGAAAATGTAGTACTCCTTCCTTCGCTGCAGAGAAGAATAGAGCATCTAGCACGGACTACATCAAATACCAAGGCACACCAGGCACCATTCCGTAACATGCTATTTTATGGCCCTCCTGGGACTGGTAAAACCATGGTTGCAAGGGAAATTGCTAAAAAATCGGGTTTAGATTATGCCATGATGACTGGAGGAGATGTTGCACCCCTGGGTCCACAGGCTGTTACCAAAATCCATGAGATATTTGATTGGGCCAAGAAATCTAGAAAAGGCTTGCTGCTTTTTATTGACGAGGCAGATGCTTTCCTTTGCGAGCGGAACAGCACCCATATGAGTGAAGCTCAACGAAGTGCTCTAAACGCATTGCTCTTCAGAACAGGAGATCAGTCAAGAGACATAGTACTTGTCCTTGCCACAAACAGACCGGGTGATCTTGACAGTGCAGTGACTGATCGCATTGATGAGGTGATTGAATTCCCACTTCCTGGGGAGGAAGAACGTTTCAAATTGTTGAAGCTCTATTTGAACAAATACCTGAGCGAAGACAATGGCAGCTCATCCATACTCAGGAAACGAGCTCAAAAAATTATCATGAAGGATATATCCGAGGATATGCTCAGGGAGGCTGCAAAGAAAACGGAGGGATTCTCGGGTCGCGAGATAGCCAAATTGGTTTCCGGCATCCGAGCAGCCGTGTATGGACGCCCAGACTGTACTTTGGATTCTCACTTGTTTAGAGAAATGGTAGATTACAAGGTTGGGGAACACCACCAACGTATAAAACTGGCGGCTGAAGGCGATCTTCCTGAGAATATATAG 1881 0.4593 MTAARLSSCVAMAAALAAASALSNKAYAESSFRFPLFSPSSSTPAPQVDQNSDTKSESQAADEPSKSGFDPESLERGAKALREINSSRYSKQVFDLMRKQEQTRLAELDAEKVHYELIQSQVDIDRQRKLAEEQRNLIQEQAQRQAQVMRYEDELARKRMQADHEAQRRHNAELVKMQEESSVRKEQARRATEEQIQAQQRQTERERAEIERETIRVGAMAEAEGRAHEAKLTEEHNSRMLRDRMQGEKEKWLAAINTTFSHIEGGLRVLLTDRDKLLMTVGGATALAAGVYTTREGAKVTWGYINRILGQPSLIRESSIAKFPGSRIISQAKNKALSYSTMAKAEKISESKTGLENVVLLPSLQRRIEHLARTTSNTKAHQAPFRNMLFYGPPGTGKTMVAREIAKKSGLDYAMMTGGDVAPLGPQAVTKIHEIFDWAKKSRKGLLLFIDEADAFLCERNSTHMSEAQRSALNALLFRTGDQSRDIVLVLATNRPGDLDSAVTDRIDEVIEFPLPGEEERFKLLKLYLNKYLSEDNGSSSILRKRAQKIIMKDISEDMLREAAKKTEGFSGREIAKLVSGIRAAVYGRPDCTLDSHLFREMVDYKVGEHHQRIKLAAEGDLPENI 626
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele51g0164 626 MobiDBLite consensus disorder prediction 173 192 - -
Lele51g0164 626 ProSitePatterns AAA-protein family signature. 487 506 IPR003960 GO:0005524|GO:0016887
Lele51g0164 626 Gene3D - 329 533 IPR027417 -
Lele51g0164 626 Coils Coil 182 216 - -
Lele51g0164 626 MobiDBLite consensus disorder prediction 38 63 - -
Lele51g0164 626 MobiDBLite consensus disorder prediction 173 209 - -
Lele51g0164 626 FunFam ATPase family AAA domain-containing protein 3 342 532 - -
Lele51g0164 626 Pfam ATPase family associated with various cellular activities (AAA) 388 515 IPR003959 GO:0005524|GO:0016887
Lele51g0164 626 SMART AAA_5 384 517 IPR003593 -
Lele51g0164 626 MobiDBLite consensus disorder prediction 38 74 - -
Lele51g0164 626 PANTHER PUTATIVE ATP-ASE 21 619 IPR039188 -
Lele51g0164 626 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 356 605 IPR027417 -
Lele51g0164 626 Pfam ATPase family AAA domain-containing protein 3, N-terminal 50 316 IPR021911 -
Lele51g0164 626 CDD AAA 380 515 - -
Lele51g0164 626 Coils Coil 124 144 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele51g0164 Lele-ChrLele51 940371 945487 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele51g0164 364 588 Miscellaneous Gene Families AT5G53170 29.915 8.26e-15 76.3
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele49g0152 49 912149 917262 Lele51g0164 51 940371 945487 hybridization
Lele50g0171 50 1004119 1005178 Lele51g0164 51 940371 945487 hybridization