Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele50g0171 ATGATGACTGGAGGTGATGTTGCACCCCTGGGCCCACAGGCTGTTACCAAAATCCATGAGATATTTGATTGGGCCAAGAAATCTAGAAAAGGCTTGCTGCTTTTTATTGATGAGGCAGATGCTTTCCTTTGCGAGCGGAACAGCACCCATATGAGCGAAGCTCAACGAAGTGCTCTAAACGCATTGCTCTTCAGAACGGGCGATCAGTCAAGAGACATAGTACTTGTCCTTGCCACAAACAGACCGGGTGATCTTGATAGCGCAGTGACTGACCGCATTGATGAGGTGATTGAATTTCCACTTCCTGGGGAGGAAGAACGTTTCAAATTGTTGAAGCTCTATTTGAACAAATACCTGAGCGAAGACAATGGCAGCTCATCCATACTCAGGAAACAAGCTCAAAAAATTATCATGAAGGATATATCCGAGGATGTTCTCAGGGAGGCTGCAAAGAAAACGGAGGGATTCTCAGGTCGCGAGGTAGCCAAATTGGTTTCCGGCATCCGAGCAGCCGTGTATGGATGCCCAGACTGTACTTTGGATTCTCAGTTGTTTAGAGAAATGGTAGATTACAAGGTTGGGGAACATCATCAACGTGTAAAACTGGCGGCTGATGGGGGTCTTCCTGGCAATATCTAG 639 0.4679 MMTGGDVAPLGPQAVTKIHEIFDWAKKSRKGLLLFIDEADAFLCERNSTHMSEAQRSALNALLFRTGDQSRDIVLVLATNRPGDLDSAVTDRIDEVIEFPLPGEEERFKLLKLYLNKYLSEDNGSSSILRKQAQKIIMKDISEDVLREAAKKTEGFSGREVAKLVSGIRAAVYGCPDCTLDSQLFREMVDYKVGEHHQRVKLAADGGLPGNI 212
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele50g0171 212 PANTHER PUTATIVE ATP-ASE 1 204 IPR039188 -
Lele50g0171 212 CDD AAA 25 101 - -
Lele50g0171 212 ProSitePatterns AAA-protein family signature. 73 92 IPR003960 GO:0005524|GO:0016887
Lele50g0171 212 Gene3D - 102 166 - -
Lele50g0171 212 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 15 190 IPR027417 -
Lele50g0171 212 Gene3D - 16 101 IPR027417 -
Lele50g0171 212 Pfam ATPase family associated with various cellular activities (AAA) 16 101 IPR003959 GO:0005524|GO:0016887
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele50g0171 Lele-ChrLele50 1004119 1005178 Dispersed/Transposed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele50g0171 50 1004119 1005178 Lele51g0164 51 940371 945487 hybridization
Lele50g0171 50 1004119 1005178 Lele52g0170 52 1009104 1013593 hybridization