Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele51g0034 ATGGCGAGAAGATGCGCACCGCTCCTTAAACAAATCTTCACCAGATCACAATCGTCCTCATGCTCCAGCAGATTCAACCCCAAGCGATCCATCACGTACATGCCCCGGCCCGGTGATGGGTCTACACGTGCCGTTACCCTTATACCTGGAGATGGCATAGGGCCTCTGGTCACCGGCGCCGTCGAGCAAGTGATGGAGGCGATGCACGCGCCCCTGCAGTTCGAGAAATATGAAGTGCGAGGGGACATGAAGAGAGTGCCACAGGAAGTGATCGATTCAATCAAGAGGAACAAAGTGTGCTTGAAGGGCGGTTTGGCTACGCCTATGGGGGGAGGAGTGAGCTCGTTGAACGTGCAGCTAAGGAGAGAGCTTGATCTGTATGCTTCGCTCGTGAATTGTTTCAATCTTCCAGGGCTGACCACAAGGCATCAGAATGTCGATATCGTCGTGATTAGGGAGAACACCGAGGGCGAGTACGCCGGTTTGGAGCACGAGGTCGTCCCCGGCGTTGTCGAAAGCCTCAAGGTAATAACAAAGTTCTGTTCAGAGCGCATTGCCAGATATGCTTTCGAGTATGCTTACCTGAATAATAGAAAGAAGGTGACTGCGGTGCACAAAGCAAACATTATGAAGCTCGCAGACGGTTTGTTTTTGCAATCCTGTAGAGAGGTCGCCAGCTATTACCCCGGAATCCTATATAACGAAATTATTGTGGATAACTGTTGCATGCAACTTGTTTCAAAACCTGAGCAGTTTGATGTCATGGTGACGCCGAATCTGTATGGGAACCTAGTGGCGAACACGGCGGCAGGCATAGCAGGAGGCACAGGAGTGATGCCGGGAGGGAATGTTGGGGCAGATCATGCGGTGTTTGAGCAAGGGGCTTCGGCAGGGAATGTTGGGAATGAGATGCTGGTGGAGCAGAAGATGGCGAACCCGGTGGCGCTGCTGCTGTCATCAGCGATGATGCTGCGGCATCTGCAGTTCCCGGCGTTTGCGGACCGATTGGAGAGTGCTGTGAAAGCAGTGATACTGGAGGGGCAGCACCGCTCTAAAGACCTGGGAGGTTCCAGCACCACCCAAGACATTGTTGATGCCGTCATAGCTGCCTTAGACTGA 1119 0.5308 MARRCAPLLKQIFTRSQSSSCSSRFNPKRSITYMPRPGDGSTRAVTLIPGDGIGPLVTGAVEQVMEAMHAPLQFEKYEVRGDMKRVPQEVIDSIKRNKVCLKGGLATPMGGGVSSLNVQLRRELDLYASLVNCFNLPGLTTRHQNVDIVVIRENTEGEYAGLEHEVVPGVVESLKVITKFCSERIARYAFEYAYLNNRKKVTAVHKANIMKLADGLFLQSCREVASYYPGILYNEIIVDNCCMQLVSKPEQFDVMVTPNLYGNLVANTAAGIAGGTGVMPGGNVGADHAVFEQGASAGNVGNEMLVEQKMANPVALLLSSAMMLRHLQFPAFADRLESAVKAVILEGQHRSKDLGGSSTTQDIVDAVIAALD 372
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele51g0034 372 FunFam Isocitrate dehydrogenase [NAD] regulatory subunit 1 32 371 - -
Lele51g0034 372 TIGRFAM mito_nad_idh: isocitrate dehydrogenase, NAD-dependent 41 370 IPR004434 GO:0006099
Lele51g0034 372 Gene3D Isopropylmalate Dehydrogenase 30 371 - -
Lele51g0034 372 SUPERFAMILY Isocitrate/Isopropylmalate dehydrogenase-like 42 371 - -
Lele51g0034 372 PANTHER DECARBOXYLATING DEHYDROGENASES-ISOCITRATE, ISOPROPYLMALATE, TARTRATE 24 371 - -
Lele51g0034 372 SMART Iso_dh_2 44 367 IPR024084 -
Lele51g0034 372 Pfam Isocitrate/isopropylmalate dehydrogenase 45 367 IPR024084 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele51g0034 Lele-ChrLele51 241898 243719 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele53g1258 53 21160021 21160902 Lele51g0034 51 241898 243719 CCT
Lele54g1231 54 17772875 17773750 Lele51g0034 51 241898 243719 CCT
Lele49g0034 49 234502 236310 Lele51g0034 51 241898 243719 hybridization
Lele50g0038 50 273791 275556 Lele51g0034 51 241898 243719 hybridization