Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele51g0033 ATGGGGATCCCCAACCCAGATTCCGACCCTGTCCTGGCCTCTTCTGTAGATGATTCACGTGGGGCTGATCTGATTTGGGACGCCGTCAGACAAGAAGCTAAGTTGGAGGTGCGCTATAACTGGGCATTTGTAGTCGGCTTTCTTCTTCTTCTTCTTCTTCTTCTTCATTTCTATTTGCTGGTTGCATTTTCTGATTCATCAAAATCAGAGGATTTGCTTGGACGCTTCACTATATTAACTCACACTGGACGAGTTGTTCGAAATATGCTGCACGCAGAAAAGGAGCCAAGTTTAAGTAACTTTTTGTATGCCAGTGTTTTATCTCATGATTGCTTGGAGCAATCCTTAGCCTTCGTTCTTGTCAATCGTCTCCAAAATCCTACTCTTTTGGCGACTCGGCTGACTGATATATTTTGTCATGTGATGATGCATGATAAAGGTATCCAAAGATCAATTCGCCTGGATGTGCAGGGCTACCATGCTCTTCAAGTTCATCGAGTAGCCCATGCAATGTGGCGCCAGGGACGCCAAGTCTTGGCCTCAGCTTTGCAAAGTCGAGTCAGTTTTCGGAGTAGACGTACATCCTGTTACCTCTTGAAGGGCTTGCATCTCTCTATTCAAGATATTGAAAACACTTTGGATATTGTTATCGTCTCTATTTACCTTTTTCTGGTTTTCTATATAGCTGCAAAAATTGGGGAGGGAATTTTATTAGATCATGGGGCAGGCGTGGTTATTGGGGAAACTGCTATCATTGGAAACAGAGTTTCATTGATGCATGGTGTTACTTTGGGAGGTTCAGGGAAGGAAATAGGTGATCGCCACCCCAAGATACCTATCTTGGGAACACTAATTGGAGCTTGTGCCACTATACTTGGGAACATAAGAATTGGTAAAGATGCAATGATAGCTGCAGGCTCTCTTGTGTTAAAAGAGGTCCCTCCCCATAGCATGGTGGCAGGAATTCCAGCAAATGTTATTGGACATCTACACGAGCATGACCCATCTTTAAGCATGAACCACGATGCTACAAAAGATTATTTCAAGCACATAGCTGCTAACTTCAGAAATGGAAAGTCTACTGCCCTTGATTTATTTCCTTTGAATGGGTTAAGAATTTTCAGGAGCTCAGGATCCAGTTATGAGGAGTCAGTGGCAACAGTTAAAGGTGATATTGGTGGAATTATGGAAAGGCATGAAGGAGATCCTCCGAAACCTGAGGAGCAGTTCACAGACAGGGATCATCACAATTATGGAAGCTATGGAAATCTTGTTTTAGAAAATGGCGTATCTGATGACAACCGCTGTCCAATTGATCCTGAGGATCAGCTTTTACAATTGGCCTTTGAACTTAGATTTCAGAATGATTTTTTGAAGTCTCAGTTTGAGGTTTTTAACAGTTTAAACAGTGTGCATAATGACTCTAGTATGGGGAAAAATGTTAGTGGCCCAGAAGAAGTTAAATCTGATATCATTGAAGAACTGCAGGGAAGGATACAAGCATTAAATAAAGAACTTTTAGATGAAAATCAAACGAGAGGTGCAGCTGAAGAGGCTCTAAAGCATCTTCAATTGGCATATACAGAGGCAGATGCGAAAGCTCAAGAGCTGTCTGAAAAGCTCGCTGAAGCTGAAAAGAAGTTGGATCAAGAAATAAAAGAGCGTGAAGAAAAGTATACTGAACTTGATATAAAGTTTAACAGGCTTCACAAACGAGCGAAACAGCGCATTCAGGAGGTTCAGAAGGAAAAAGATGATCTTGAGGTCCAATTTAGTGAGGTGAATGAAAAGGCTGAGCAAGCATCATCCCAGCAATCGTCATTGCAGGAAGAGTTAGAGCGCACAAGGAAGCAAGCAAATGAGGCATTGAAGGCCATGGATGGGGACAGACAGCAACTAAGAAATGCAAATAACAAACTTCGCGATACCATTGAGGATTTGAGGCGCTCATTGCAACCAAAGGAGACTGCCCTTGAAGCATTGCAACAGTCACTTGCAGAAAAGGAACAGATGATAGAAGATATGAGATGCTTGCTCCAGGCAGCTGATGAAAAGAAGCAAGCTGCACTGACTGAGCTTTCAGCTAAACATCAGAAGAATATGGAGAGTTTGGAAGCTCAGCTTAACGATGCTATATCTGATAGAAATAAAGCAGCTGAAACTATTTCCTCACTGCAGGTGCTAGTTGCAGAGAAAGAATCTAAGATTGCTGAGATGGAGGCAGCATCAACTGGGGAAGCTGCACGACTCAGAGCGGCTGTTGAAAGTGTGAAGGGGGAGCTGTCTCACCTGAAACAGGAGCATGAGAAAGAAAAGGAAAGTTGGGCAACTGCAGCTCAGGCACTCAAGGCAAAACTTGAAATTGCGGAGAGTAACTGCATACATGCTGAAATTGAAGTAACAAAAATGAGAAGTCAGATGGAATCAGAAGTATCTGCACAAACCAGGATTCTCAATATGAGAGATGCAGAATTGTTGTCTGCCAAGGAAGAGATCAGCCGCCTTGAGAATGAATTTTCTTCCTACAAAGTTCGTGCTCACTCACTTCTTCAGAAGAAGGATGCAGAACTGGCAGCAGCCAAAGACTCTGAGCAAGTCAAAGCTGTTGAGGAAGCTTTAAAAGAGGCTGAAAATGAAGTATTATCAGTAACAGAAGAAAGGGATAGAGCTCTTCAAGATCTTCAAGATGCAACAACAATTCACGAGAAAGAACTCACAGAAAGAGACACAGCACTTGAAAATTTCAAGGAGCAAATAAGAAGTTTAGAAATGAAATTTGATTATGTTAATGCTCAGCACCTAAAAGAGAAAGAAGCATGGGGACTCAGCCTTCAAAATGTTGAAGAAACATGGCGAATTAAATATGAGGCCATGAAGGCTGAAACTGAAGGATTTTCGGCACATGATATGCAACTACGAAAGGAACTTGAAGAGCTCAAACAAAAGTACAAAAAATTGAAGGAAGAGCATGATTCTTTTCGTGATCTTGCTGATAGAATGATTCAGGAGAAAGACAATGAAATGTCTAGACTTTTAGATGATAAAAATAATCTTCACCAGTCCCAGCAATCAAGCTCATTGGTGGATCAACATGATTATTATAGCACAGATCATTTCTCTTCAGCCTTGCATAATGGGGATTTACTGAACCTAAGCCCCTCATCTGCAGAACAGCAAATTCTGCTTCTGGCTAGACAACAAGCCCAAAGAGAGGAAGAGCTGGCACGGTCACAGCGGCATATCTTGGCTCTTCAAGAAGAAATTGAAGAACTTGAACGTGAAAATCGTCTCCATAGCCAACAGGAAGCAATGTTAAAGACAGAACTTCGTAACATGGAAAGATCGAAAACGAGGGAAGGAGTAGATATGACCTATTTGAAAAATGTCATTTTAAAGCTTCTTGAGACAGGTGAAGTGGAGGCACTATTGCCAGTCATTGCGATGCTGCTTCAGTTTAGTCCAGAAGAGATGCAGAAGTGTCAACAAGCTTATCGCAGCTCAACAGAAGTTCCACCAAGTCCAGGAAGTGAATCTTCGGGATCTGGCCTATCTCTTTTCTCAAGATTCTCATTTTCATAG 3579 0.4202 MGIPNPDSDPVLASSVDDSRGADLIWDAVRQEAKLEVRYNWAFVVGFLLLLLLLLHFYLLVAFSDSSKSEDLLGRFTILTHTGRVVRNMLHAEKEPSLSNFLYASVLSHDCLEQSLAFVLVNRLQNPTLLATRLTDIFCHVMMHDKGIQRSIRLDVQGYHALQVHRVAHAMWRQGRQVLASALQSRVSFRSRRTSCYLLKGLHLSIQDIENTLDIVIVSIYLFLVFYIAAKIGEGILLDHGAGVVIGETAIIGNRVSLMHGVTLGGSGKEIGDRHPKIPILGTLIGACATILGNIRIGKDAMIAAGSLVLKEVPPHSMVAGIPANVIGHLHEHDPSLSMNHDATKDYFKHIAANFRNGKSTALDLFPLNGLRIFRSSGSSYEESVATVKGDIGGIMERHEGDPPKPEEQFTDRDHHNYGSYGNLVLENGVSDDNRCPIDPEDQLLQLAFELRFQNDFLKSQFEVFNSLNSVHNDSSMGKNVSGPEEVKSDIIEELQGRIQALNKELLDENQTRGAAEEALKHLQLAYTEADAKAQELSEKLAEAEKKLDQEIKEREEKYTELDIKFNRLHKRAKQRIQEVQKEKDDLEVQFSEVNEKAEQASSQQSSLQEELERTRKQANEALKAMDGDRQQLRNANNKLRDTIEDLRRSLQPKETALEALQQSLAEKEQMIEDMRCLLQAADEKKQAALTELSAKHQKNMESLEAQLNDAISDRNKAAETISSLQVLVAEKESKIAEMEAASTGEAARLRAAVESVKGELSHLKQEHEKEKESWATAAQALKAKLEIAESNCIHAEIEVTKMRSQMESEVSAQTRILNMRDAELLSAKEEISRLENEFSSYKVRAHSLLQKKDAELAAAKDSEQVKAVEEALKEAENEVLSVTEERDRALQDLQDATTIHEKELTERDTALENFKEQIRSLEMKFDYVNAQHLKEKEAWGLSLQNVEETWRIKYEAMKAETEGFSAHDMQLRKELEELKQKYKKLKEEHDSFRDLADRMIQEKDNEMSRLLDDKNNLHQSQQSSSLVDQHDYYSTDHFSSALHNGDLLNLSPSSAEQQILLLARQQAQREEELARSQRHILALQEEIEELERENRLHSQQEAMLKTELRNMERSKTREGVDMTYLKNVILKLLETGEVEALLPVIAMLLQFSPEEMQKCQQAYRSSTEVPPSPGSESSGSGLSLFSRFSFS 1192
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele51g0033 1192 MobiDBLite consensus disorder prediction 595 609 - -
Lele51g0033 1192 PANTHER SERINE ACETYLTRANSFERASE 91 351 - -
Lele51g0033 1192 Coils Coil 818 845 - -
Lele51g0033 1192 ProSiteProfiles GRIP domain profile. 1116 1163 IPR000237 -
Lele51g0033 1192 MobiDBLite consensus disorder prediction 594 616 - -
Lele51g0033 1192 MobiDBLite consensus disorder prediction 1162 1192 - -
Lele51g0033 1192 Pfam Serine acetyltransferase, N-terminal 91 158 IPR010493 GO:0005737|GO:0006535|GO:0009001
Lele51g0033 1192 Coils Coil 492 565 - -
Lele51g0033 1192 Gene3D - 485 654 - -
Lele51g0033 1192 Coils Coil 1074 1108 - -
Lele51g0033 1192 SMART SATase_N_2_a 86 164 IPR010493 GO:0005737|GO:0006535|GO:0009001
Lele51g0033 1192 SMART 1grip 1119 1163 IPR000237 -
Lele51g0033 1192 Coils Coil 747 799 - -
Lele51g0033 1192 ProSitePatterns Hexapeptide-repeat containing-transferases signature. 285 313 IPR018357 GO:0016740
Lele51g0033 1192 Gene3D serine acetyltransferase, domain 1 87 155 IPR042122 -
Lele51g0033 1192 Gene3D serine acetyltransferase, domain 1 156 190 IPR042122 -
Lele51g0033 1192 Coils Coil 570 650 - -
Lele51g0033 1192 FunFam Serine acetyltransferase 226 347 - -
Lele51g0033 1192 Coils Coil 969 1021 - -
Lele51g0033 1192 CDD LbH_SAT 229 323 IPR045304 -
Lele51g0033 1192 Coils Coil 912 932 - -
Lele51g0033 1192 SUPERFAMILY Trimeric LpxA-like enzymes 89 340 IPR011004 -
Lele51g0033 1192 Pfam GRIP domain 1120 1159 IPR000237 -
Lele51g0033 1192 Coils Coil 658 742 - -
Lele51g0033 1192 Gene3D Hexapeptide repeat proteins 228 354 - -
Lele51g0033 1192 Coils Coil 859 893 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele51g0033 Lele-ChrLele51 223322 238937 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele51g0033 96 365 Miscellaneous Gene Families AT2G17640 55.172 9.04e-96 307
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele49g0032 49 214875 224843 Lele51g0033 51 223322 238937 hybridization
Lele50g0036 50 255127 266694 Lele51g0033 51 223322 238937 hybridization