Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele51g0022 ATGTTCGTGAAGAAGCTGGTGGAGAAAGCCTCCATCAAGAAGCCTGGGGGGAATTCAGATGGGTTAAAAGCCAGCGATTTAGACGTACGTTTGGCTTTTCACTATGGGCTCCCATCCAACGCCGCCAAATTAGCTTATGACAATATTCACAAGATTCTTGCTCTCTCCACAAAGGATGGCAGAATTAAACTATTTGGAAAAAATAACACTCAAGCCATCCTCCAATCTCCTGAGCCAGTGCCTAGCAAGTTCCTACAGTTCATCCAAAATCAAGGTATCCTTATAAATGTCACTCTCAATAACCATATTGAGGTTTGGAACATTGACAAGAAGCTGTTGGCTGATGAATATGTTATTCAAAAAGAAATTACTTCCTTTGCTGTCATTCAGCATAGCTTCTGCATGTACATTGGAGATTCTGTCGGCAATATTTCGGTTTTCAGCCTGGATCAAGAACCCTGGCATATAACACAGATGAAATACATCATCCCTGTATCAGCTTCTTATGGGAGTCCAACTGAAGTGTCAGATGATACTGCTGTCACACATATATTGCCTCTACCAGCTGCTGAAAGTAAGAGGGTTCTCATAATCTTTAGAAATGGCCAAATAATATTATGGGATATTCAAGAAAGCAAATCTATCTTCAGAACTGGTGGAAACATATCACAAGCATCCCATAATGAAACTAAGAAAGCGACTTCTGCATGCTGGGCATGCCCTTTTGGAAGTAAATTGGTTGTAGGGTACAGCAACGGAGAACTTTTAATTTGGAATATCCCTACTCAAAACGTTGGGAATGATTCAGCATCTGATTGTACTACTCAAAACACTCCCATGTTCAAGCTTAACCTAGGCTATAAATCAGATAAAATTCCCATTGGCTTAGTAAAATGGATATATGCTGAAGGAAAGGCAAGTCGACTTTACGTCCTCGGAGCTTCTGACTTTGCATCTCCAAACTTAGTCCAGGTAGTGTTACTGAACGAGAAGACCGAGTCTCGCACAATTAAGGTGGGCCTTCATTTGGCTGAATGTTGTATTGACATGGAGGTCTTATCAACTTCAAGTGAGCAAATCAAGCATAAACAGGATTCTTTCATTTTGCTTGGGAAATCAGGCCGTGTTTATGTCTACGATGATACTTTGATCGAAAGGTATCTTCTACAATGCCAGTCCAAGTCCTCACCCTCGCTGCCAAAGGAAGTGATGATTAAGTTGCCCCTGTCAGATTCAAGCATCACGGCAGCAAAGTTCATCACAGACAATCCCATTTTCCGAAATCCCGATGATGAGGAATATGTTCAGCTGTTGAAAAACTACCCACCTCTTATTCCCATTGAAACAAAACACAAAGACGTGGCTATTCTGAATGCTTCCAACTTCACTGGATTTTCAAAAGTCAAAAACTTGTACATAACTGGCCACAGTGACGGGGCCATAACTTTCTGGGATGCGTCGTGTCCCTTTTTCATCCCAATTTTGCAGTTGAAGCAACAGAGTGAACATGAGTTTTCTACAAGTGGCATACCCATAACAGCATTATATTTTGATACCAACTCGCCTCTTCTTGTTTCTGGAGACCAGAGTGGAATGGTTCGCATCTTCAGATTCAAACCTGGACCTTATTCAAGCAACGGCTTCATGTCTCTAGCGGGAAGCACAAAAAAAACGACTGATCATATCATTCATAGTGTGAAACTTGTAAAGACTAATGGTGCTGTACTATCCATGAACATGGATCATGGCTCAAAATATCTTGCTGTTGGTTCTGATCAAGGATATGTTTCAGTTATCGATATGAATGGCTCAACTTTGTTATATCAGAAACAAATCACAAGTGAGATTAGTACCGGTATCATCTCTCTTCAGTTCCGAACATGCAGTTTGCAGGGTTTTAAGAAAAATATTTTAGCTGTTGGAACAAAGGATTCATCTGTTTTGGCACTTGATGGTGAAACTGGAAACCAATTGAGCACTTACACTGTTCATCCTAAGAAGCTATCTGGAGCTCTGCTAATGCAAGTGCTAGATGGACAAGGAGAATTAACCAAGGGATTGGGTACAAGCGAGGCGAATGATATTGATGATGCAACAACAAAGCAATTGTGCGTTTTGTTGTGTTCTGAGAAAGCTTTGTATGTCTATTCTTTTGTGCATGTTGTTCAGGGTGTTAAAAATGTGCTTCACAAGAAGAAGTTTCATTCCTCATACTGTTGCTGGGCATCTACATTCCACACTCATTCTGATATTGGACTTGTGCTCCTTTTCACCAATGGAAAAGTAGAACTAAGGTCTTTGCCAGAGTTGTCCCTGATCGTGGAGGCCTCAATCAGAGATTTCACTTATTCACCTCCGAAATTGAAGTCATTTTCTGATAGACAAATGTGCTGTTCATCCAAAGGAGATCTTGTTATGGTGAATGGTGACCAGGAAATTTTGGTTGCCTCAGTGTTGGCCAACAGGGACGTTTTCAGGCTTTTGGACAGCGTCGGTTGCATCTACAGGAAAGAAAGGATGCTATCACAAGAAGACGTTGTTCCTGCCCCAGTAATCCACAAGGAAAAGAAAAGGGGTATATTTAGCTCTGTTATCAAAGATTTTACTGGAAGTAAAGAAAAGAATGTGAGCCTCATGGAAACAGAAGATACCAAAGAAAGCAAGCAACTCTCAGTGATATTTTCTAATGAAAATTTTGCAAGTGATGCTGACACTAATGATAACCTCAACATGGATGAGGATGAGCCTGAATTAAACATAGATGACATTGACCTCGAGGATCCTGGAGAAAAACGCAAAGATCAAAGGATACTGGGAACTCTCAATAAGAAGAATTTGGCTGGCAAATTTCAGGCTCTAAAGGGAAGGTTGAAAGACATGAAGGGCAACTCTCAGAAAACATCAGATAATAAGGAAGAGCTGCAACAGGATGAGAAAGGTGGCGCAGTGGATCAAATCAAGAAAAAATATGGGTTCTCTTCCTCCTCCGATGAAACAAGCACTGCTAAATTGGCACAAAACAAGTTGCAGGAAAACATGTTGAAACTGCAGGGTATCAATCTTCGAGCTACACAGATGCAGGATACGGCAAGATCATTTTCATCATTGGCAAAACAGGTCCTGCGAACTGCTGAACAGGATAAACGTTGA 3150 0.4098 MFVKKLVEKASIKKPGGNSDGLKASDLDVRLAFHYGLPSNAAKLAYDNIHKILALSTKDGRIKLFGKNNTQAILQSPEPVPSKFLQFIQNQGILINVTLNNHIEVWNIDKKLLADEYVIQKEITSFAVIQHSFCMYIGDSVGNISVFSLDQEPWHITQMKYIIPVSASYGSPTEVSDDTAVTHILPLPAAESKRVLIIFRNGQIILWDIQESKSIFRTGGNISQASHNETKKATSACWACPFGSKLVVGYSNGELLIWNIPTQNVGNDSASDCTTQNTPMFKLNLGYKSDKIPIGLVKWIYAEGKASRLYVLGASDFASPNLVQVVLLNEKTESRTIKVGLHLAECCIDMEVLSTSSEQIKHKQDSFILLGKSGRVYVYDDTLIERYLLQCQSKSSPSLPKEVMIKLPLSDSSITAAKFITDNPIFRNPDDEEYVQLLKNYPPLIPIETKHKDVAILNASNFTGFSKVKNLYITGHSDGAITFWDASCPFFIPILQLKQQSEHEFSTSGIPITALYFDTNSPLLVSGDQSGMVRIFRFKPGPYSSNGFMSLAGSTKKTTDHIIHSVKLVKTNGAVLSMNMDHGSKYLAVGSDQGYVSVIDMNGSTLLYQKQITSEISTGIISLQFRTCSLQGFKKNILAVGTKDSSVLALDGETGNQLSTYTVHPKKLSGALLMQVLDGQGELTKGLGTSEANDIDDATTKQLCVLLCSEKALYVYSFVHVVQGVKNVLHKKKFHSSYCCWASTFHTHSDIGLVLLFTNGKVELRSLPELSLIVEASIRDFTYSPPKLKSFSDRQMCCSSKGDLVMVNGDQEILVASVLANRDVFRLLDSVGCIYRKERMLSQEDVVPAPVIHKEKKRGIFSSVIKDFTGSKEKNVSLMETEDTKESKQLSVIFSNENFASDADTNDNLNMDEDEPELNIDDIDLEDPGEKRKDQRILGTLNKKNLAGKFQALKGRLKDMKGNSQKTSDNKEELQQDEKGGAVDQIKKKYGFSSSSDETSTAKLAQNKLQENMLKLQGINLRATQMQDTARSFSSLAKQVLRTAEQDKR 1049
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele51g0022 1049 CDD R-SNARE_STXBP5_6 985 1042 - -
Lele51g0022 1049 Gene3D - 451 751 IPR015943 GO:0005515
Lele51g0022 1049 PANTHER LETHAL 2 GIANT LARVAE PROTEIN 5 1043 - -
Lele51g0022 1049 SMART WD40_4 450 485 IPR001680 GO:0005515
Lele51g0022 1049 SMART WD40_4 498 537 IPR001680 GO:0005515
Lele51g0022 1049 SMART WD40_4 559 600 IPR001680 GO:0005515
Lele51g0022 1049 SMART WD40_4 218 259 IPR001680 GO:0005515
Lele51g0022 1049 Coils Coil 957 977 - -
Lele51g0022 1049 FunFam Syntaxin-binding protein 5 isoform A 22 181 - -
Lele51g0022 1049 Gene3D - 48 268 IPR015943 GO:0005515
Lele51g0022 1049 MobiDBLite consensus disorder prediction 955 982 - -
Lele51g0022 1049 Pfam Lethal giant larvae(Lgl) like, C-terminal 586 823 IPR013905 -
Lele51g0022 1049 SUPERFAMILY WD40 repeat-like 45 609 IPR036322 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele51g0022 Lele-ChrLele51 143355 150974 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele49g0020 49 135877 143542 Lele51g0022 51 143355 150974 hybridization
Lele50g0023 50 183679 191403 Lele51g0022 51 143355 150974 hybridization