Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele50g0023 ATGTTCGTGAAGAGGCTGGTGGAGAAAGCCTCCATCAAGAAGCCTGGTGGGAATTCAGACGGGTTAATAAAAGGCAGCGATTTAGACGTACATTTGGCTTTTCACTATGGGGTCCCATCCAACGGCGCCAAATTTGCTTATGACCATAATCACAAGATTCTTGCTCTCTCCACAAAGGATGGCAGGATTAAACTATTTGGAAAAAATAACACTCAAGCCATCCTTCAATCTCCTGAGCCAGTGCCCAGCAAGTTTCTACAGTTCATCCAGAACCGAGGCATCCTTATAAATGTCACTCTCAATAACCATATTGAGGTTTGGGACATTGACAAGAAGCTGTTGGCTGATGAGTATGTTGTTCAAAAAGAAATTACTTCCTTTGCTGTCATTCAGAATAGCTTCTACATGTACGTTGGAGATTCTGTTGGCAATATTTCGGTTTTCAACCTGGATCAAGAACCCTGGCATTTAATACAGATGAAATACATCATCCCTCTATCAGCTTCTTATGGGAATCCAACTGAGGTATCAGATGATACTGCTGTGACACATATATTGCCTCAACCAGCAGCTGAAAGCAAGAGGGTTCTGATAATATTTAGAAATGGCCAAATAATATTATGGGATATTCAAGAAAGCGAACCTATCTTCAGAACTGGTGGAAACGTATCGCAGGCATCCCATAATGAAACTAAGAAAGCGACTTCTGCATGCTGGACATGTCCTCTTGGAAGTAAAGTGGTTTTAGGGTACAGCAACGGAGAGCTTTTAATTTGGAATATCCCTTCTCAAAACGTTGGGAATGATCCAGCATCTGATTGTGCTACTCAGAACACTCCTATGCTCAAGCTTAATCTAGGCTATAAATCAGATAAAATTCCCATTGGCTCAGTAAAATGGATATATGCTGAAGGAAAGGCAAGTCGACTTTATGTCCTCGGAGCTTCTGACATTGCATCTCCAAACTTAGTCCAGGTAGTGTTACTGAATGAGAAGACTGAGTCTCGCACAATTAAGGTGGGCCTTCATTTGGCCGAATGTTGTGTTGACATGGAGGTCTTATCAACTTCAAGTGAGCAAGGCAAGCATAAACAGGATTCTTTCATTTTGATTGGGAAATCAGGCCGTGTTTATGTGTACGATGATGCTTTGATCGAAAGGTATCTTCTGCAGTGCCAGTCCAAGTCCTCACCCTCACTGCCAAAGGAAGTGATGATTAAGTTGCCACTGCCAGATTCAAGCATCACCGCGACAAAGTTCATCTCAGACAATCCTAATCTCCGAATTCCCGATGAGGAGGAATATGTTCAGCTGCTGAAAAACTACCCACCTCTTATTCCCATTGAAACAAAACACAGAGACGGGGCTATTCTGAACTCTTCCAACTTCACTGGATTTTCAAAAGTAAAAAACTTGTACCTAACTGGCCACTGTGATGGAGCCATAACTTTCTGGGATGCGTCGTGTCCCTTTTTCATCCCAATTTTGCAGTTGAAGCAACAGAGCGAACATGAGTTTTCTCCAAGTGGCGTACCCATAACAGCATTATATTTTGAAACCAACTCGCCCCTTCTTGTTTCTGGAGACCAGAGTGGAATGGCTCGCATCTTCCGATTCAAACCCGAACCTTATTCAACCAACAGCTTCATCTCTCTTGCGGGAAGCACAAAAAAAGCGACTGATCATATAATTCAGAGTGTGAAACTTATAAAGACTAATGGTGCTGTACTATGCATGAACATGGATCATGGCTCAAAACATCTTGCTGTTGGTTCTGATAAAGGATATGTTTCAGTTATTGATATGAATGGCTCAACTCTGTTATATCAGAAACAAATAACAAGTGAGATTAGTACTGGTATCATCTCTCTACAGTTCCGAACATGCAGTTTGCAGGGTTTTAAGAAAAACATTTTAGCCGTTGGAACAAAGGATTCGTCTGTTTTGTCACTTGATAGTGAAACTGGAAACCAATTGAGCGCTGACACCGTTCATCCTAAGAAGCCGTCTAGAGCTCTGCTAATGCAAGTGTTAGATGGACAAGGAGAATTAACCAAGGGACTGGGTACAGGCGAGGTGAATGATATTGATGATGCGACAACAAAGCAATTGTGCGTTTTGTTGTGTTCTGAGAAAGCTCTGTATGTCTATTCTTTGGTGCATGTTGTTCAGGGTGTTAAAAAGGTGCTTCACAAGAAGAAGTTTCATTCCTCATCCTGTTGCTGGGCATCTACATTCCACACTCATTCTGATATCGGACTTGTGCTCCTTTTCACCAATGGAAAAGTAGAACTAAGGTCTTTGCCAGAGTTGTCCCTGATCGTGGAGGGCTCCATCAGAGATTTCACTTATTCACCTCCGAGATCGAAGTCATTTTCTGATAGACAAATGTGCTGTTCTTCCGAAGGAGATCTTGTTATGGTCAATGGTGACCAGGAAATTTTGTTGGTCTCGGTGTTGGCCAGCAGGGACGTTTTCAGGCTTATGGACAGCGTCAGCCGTATCTACAGGAAAGAAACGATGCTATCACAAGACGACGTTGTGCCTGCCCCAGTAATCCATAAGGAAAAGAAAAAGGGCATATTTAGCTCTGTCATCAAAGATTTTACTGGAAGTAAAGAAAAGCATGTGACCCTCATGGAAACAGAAGGTACAAAAGAATGCATACAGCAACTCTCAGTGATCTTTTCTAATGCAAATTTTGCAAGTGATGCTGGCACTAACGATGAGCTCACCATGGATGAGGATGACCGTGAATTAAACATAGATGACATTGACCTCGAGGATCCTGGAGAAAAACGCAAAGATCAAAGGATACTGGGAACTCTTAATAAGAAGAATTTGGCTGGCAAGTTTCAGGCTCTAAAGGGAAGGTTGAAAGACATGAAGAGCAGCGCTCAGAAAACATCAGATAATAGGGAAGAGCAACAGGATGAGATAGGTGGCGCAGTTGATCAAATCAAGAAAAAATATGGCTTTTCTTCTTCTTCCGATGAAACAAGCACTGCTAAATTGGCACAAAACAAGTTGCAGGAAAACATGCGGAAACTACATGGTATCAATCTTCGAGCTACACAGATGCAGGATACGGCAAGATCATTTTCATCATTGGCAAAACAGGTCCTGCGAACTGCTGAACAGGATAAACGCTGA 3153 0.4225 MFVKRLVEKASIKKPGGNSDGLIKGSDLDVHLAFHYGVPSNGAKFAYDHNHKILALSTKDGRIKLFGKNNTQAILQSPEPVPSKFLQFIQNRGILINVTLNNHIEVWDIDKKLLADEYVVQKEITSFAVIQNSFYMYVGDSVGNISVFNLDQEPWHLIQMKYIIPLSASYGNPTEVSDDTAVTHILPQPAAESKRVLIIFRNGQIILWDIQESEPIFRTGGNVSQASHNETKKATSACWTCPLGSKVVLGYSNGELLIWNIPSQNVGNDPASDCATQNTPMLKLNLGYKSDKIPIGSVKWIYAEGKASRLYVLGASDIASPNLVQVVLLNEKTESRTIKVGLHLAECCVDMEVLSTSSEQGKHKQDSFILIGKSGRVYVYDDALIERYLLQCQSKSSPSLPKEVMIKLPLPDSSITATKFISDNPNLRIPDEEEYVQLLKNYPPLIPIETKHRDGAILNSSNFTGFSKVKNLYLTGHCDGAITFWDASCPFFIPILQLKQQSEHEFSPSGVPITALYFETNSPLLVSGDQSGMARIFRFKPEPYSTNSFISLAGSTKKATDHIIQSVKLIKTNGAVLCMNMDHGSKHLAVGSDKGYVSVIDMNGSTLLYQKQITSEISTGIISLQFRTCSLQGFKKNILAVGTKDSSVLSLDSETGNQLSADTVHPKKPSRALLMQVLDGQGELTKGLGTGEVNDIDDATTKQLCVLLCSEKALYVYSLVHVVQGVKKVLHKKKFHSSSCCWASTFHTHSDIGLVLLFTNGKVELRSLPELSLIVEGSIRDFTYSPPRSKSFSDRQMCCSSEGDLVMVNGDQEILLVSVLASRDVFRLMDSVSRIYRKETMLSQDDVVPAPVIHKEKKKGIFSSVIKDFTGSKEKHVTLMETEGTKECIQQLSVIFSNANFASDAGTNDELTMDEDDRELNIDDIDLEDPGEKRKDQRILGTLNKKNLAGKFQALKGRLKDMKSSAQKTSDNREEQQDEIGGAVDQIKKKYGFSSSSDETSTAKLAQNKLQENMRKLHGINLRATQMQDTARSFSSLAKQVLRTAEQDKR 1050
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele50g0023 1050 SUPERFAMILY WD40 repeat-like 415 781 IPR036322 GO:0005515
Lele50g0023 1050 FunFam Syntaxin-binding protein 5 isoform A 23 182 - -
Lele50g0023 1050 MobiDBLite consensus disorder prediction 959 978 - -
Lele50g0023 1050 Gene3D - 40 384 IPR015943 GO:0005515
Lele50g0023 1050 Coils Coil 959 979 - -
Lele50g0023 1050 Gene3D - 448 821 IPR015943 GO:0005515
Lele50g0023 1050 CDD R-SNARE_STXBP5_6 986 1043 - -
Lele50g0023 1050 Pfam Lethal giant larvae(Lgl) like, C-terminal 704 827 IPR013905 -
Lele50g0023 1050 SUPERFAMILY WD40 repeat-like 47 647 IPR036322 GO:0005515
Lele50g0023 1050 SMART WD40_4 110 149 IPR001680 GO:0005515
Lele50g0023 1050 SMART WD40_4 499 538 IPR001680 GO:0005515
Lele50g0023 1050 SMART WD40_4 219 260 IPR001680 GO:0005515
Lele50g0023 1050 SMART WD40_4 401 486 IPR001680 GO:0005515
Lele50g0023 1050 SMART WD40_4 563 601 IPR001680 GO:0005515
Lele50g0023 1050 PANTHER LETHAL 2 GIANT LARVAE PROTEIN 19 1044 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele50g0023 Lele-ChrLele50 183679 191403 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele50g0023 50 183679 191403 Lele51g0022 51 143355 150974 hybridization
Lele50g0023 50 183679 191403 Lele52g0025 52 171806 179784 hybridization