Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele50g0647 ATGGCTTCGTCGGCGAAAACGATACTCGTGACCGGAGGGGCCGGCTTCATCGGCTCTCACACCGTCGTTCTGCTTCTCAAAGGTGGCTTTAACGTTACTATCATCGATAATCTTGACAACTCCGTCATGGAAGCCGTCAACCGTGTTCGGGATTTGGTCGGCCCCGATTCTTCTAAGAACCTCGACTTCATTCAAGGTGAAGCGAGAACGATACCCTGTGATGAGAATTGTGAGTTAACGGCCGTGAGTCCTTATGGAAGGACCAAGCTGATACTGGAAGACATTGCAAGAGACCTTCAAAAAGCAGAACTAGATTGGGGGGATGGTCACATCGCTGCCCTGCGCAAGCTTTTCAACACAGACAATATGGGTTGTACGGCTTACAACCTAGGAACTGGTCGTGGTACGTCGGTGCTTGAAATGGTTGCCGCATTCGAAAAAGCTTCTCGAAAGGTAACTAAGAAATATGAACATAATCTTGCTTTGTGCATGCAAGTGAGGAGGATAATGAGAGATGGAGATTTGATGTTTCAGAAAATTCCGCTAAAAAAGTGTCCCAGGAGAGCAGGAGATGCTGCTGCTGTATATGCATCAACAGAGAAAGCTGAGAAAGAACTAGGGTGGAAGTAA 630 0.473 MASSAKTILVTGGAGFIGSHTVVLLLKGGFNVTIIDNLDNSVMEAVNRVRDLVGPDSSKNLDFIQGEARTIPCDENCELTAVSPYGRTKLILEDIARDLQKAELDWGDGHIAALRKLFNTDNMGCTAYNLGTGRGTSVLEMVAAFEKASRKVTKKYEHNLALCMQVRRIMRDGDLMFQKIPLKKCPRRAGDAAAVYASTEKAEKELGWK 209
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele50g0647 209 Pfam GDP-mannose 4,6 dehydratase 9 67 IPR016040 -
Lele50g0647 209 PANTHER UDP-GLUCOSE 4-EPIMERASE 105 209 - -
Lele50g0647 209 Gene3D - 8 53 - -
Lele50g0647 209 Gene3D - 105 209 - -
Lele50g0647 209 Gene3D - 66 103 - -
Lele50g0647 209 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 5 209 IPR036291 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele50g0647 Lele-ChrLele50 3972861 3974044 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele50g0647 50 3972861 3974044 Lele50g0647 50 3972861 3974044 ECH
Lele50g0647 50 3972861 3974044 Lele51g0638 51 3859268 3861201 hybridization
Lele50g0647 50 3972861 3974044 Lele52g0640 52 4056869 4058823 hybridization