Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele51g0638 ATGGCTGCTTCGTCCGCGAAAACCATACTCGTGACCGGAGGGGCCGGTTTCATCGGCTCTCACACCGTTGTTCAACTTCTCAAAGGTGGCTTCAACGTTACTATCATCGATAACCTCGACAACTCCGTCATGGAATCCGTAAACCGTGTTCGGGATTTGGTCGGCGCCGACTCTTCTACGAACCTCGACTTCGTCCAAGGTGATCTCAGGAGTGTAGATGACTTGGAGAAACTGTTTTCCAAAACCAAATTTGATGCGGTGATCCATTTTGCGGGGTTAAAAGCTGTTGGAGAGAGTGTTCAAAATCCCCTCCGGTATTTTGAATATAATTTAATCGGCACCATCAATCTCTACCAAACCATGAAAAAGTACAACTGTAAAAAGATGGTATTCTCATCATCTGCAACCGTCTATGGTGAAGCTAAAACGATACCCTGTGATGAGAATTGCGAGTTAATGGCCGTGAGTCCTTATGGAAGGACCAAGCTGATACTGGAAGACATTGCTAGAGACCTTCAAAAAGCAGAACCAGACTGGGGAATCATTTTACTTCGATACTTCAATCCAGTAGGAGCTCATGAGAGTGGCAAAATTGGTGAAGATCCGAGAGGAATTCCCAATAATCTTATGCCTTTCATACAGCAAGTTGCTGTCGGAAGATTGCCTGAGCTCAACGTATTTGGTCTTGATTACCCCACAAAAGATGGCACTGCGGTACGAGACTATATCCATGTAATGGACTTGGCAGATGGGCACATCGCTGCCCTGCGCAAGCTTTTCAACACATACAATATCGGTTGTACGGCGTACAACCTAGGAACTGGTCGTGGTACGTCCGTGCTTGAAATGGTTGCAGCTTTCGAAAAAGCTTCTGGGAAGAAAATTCAGCTGAAAAAGTGTCCGAGGAGGGCAGGAGATGCTGTTGCTGTATACGCGTCTACAGAGAAAGCTGAGAAAGAATTAGGGTGGAAGGCAAAATATGGCGTTGAGGAAATGTGCAGGGACCAATGGTGTTGGGCAAGCAACAACCCGTGGGGCTACAAGGGGAAGCCATAG 1056 0.4669 MAASSAKTILVTGGAGFIGSHTVVQLLKGGFNVTIIDNLDNSVMESVNRVRDLVGADSSTNLDFVQGDLRSVDDLEKLFSKTKFDAVIHFAGLKAVGESVQNPLRYFEYNLIGTINLYQTMKKYNCKKMVFSSSATVYGEAKTIPCDENCELMAVSPYGRTKLILEDIARDLQKAEPDWGIILLRYFNPVGAHESGKIGEDPRGIPNNLMPFIQQVAVGRLPELNVFGLDYPTKDGTAVRDYIHVMDLADGHIAALRKLFNTYNIGCTAYNLGTGRGTSVLEMVAAFEKASGKKIQLKKCPRRAGDAVAVYASTEKAEKELGWKAKYGVEEMCRDQWCWASNNPWGYKGKP 351
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele51g0638 351 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 7 348 IPR036291 -
Lele51g0638 351 TIGRFAM galE: UDP-glucose 4-epimerase GalE 9 344 IPR005886 GO:0003978|GO:0006012
Lele51g0638 351 Gene3D - 9 280 - -
Lele51g0638 351 Pfam GDP-mannose 4,6 dehydratase 10 335 IPR016040 -
Lele51g0638 351 CDD UDP_G4E_1_SDR_e 8 339 IPR005886 GO:0003978|GO:0006012
Lele51g0638 351 Gene3D - 198 340 - -
Lele51g0638 351 FunFam UDP-glucose 4-epimerase 4 283 351 - -
Lele51g0638 351 PANTHER UDP-GLUCOSE 4-EPIMERASE 6 349 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele51g0638 Lele-ChrLele51 3859268 3861201 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele51g0638 8 324 Miscellaneous Gene Families AT4G00110 28.228 6.97e-25 102
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele51g0638 51 3859268 3861201 Lele51g0638 51 3859268 3861201 ECH
Lele49g0620 49 3758791 3760740 Lele51g0638 51 3859268 3861201 hybridization
Lele50g0647 50 3972861 3974044 Lele51g0638 51 3859268 3861201 hybridization